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Cluster: CGMR001923_CGC137

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_94440 k141_94440_17 17730 19463 - GH163
CAZyme k141_94440 k141_94440_18 19487 22306 - GH2
TC k141_94440 k141_94440_19 22401 24158 - 3.A.1.1.10
TC k141_94440 k141_94440_20 24209 25096 - 3.A.1.1.29
TC k141_94440 k141_94440_21 25129 26088 - 3.A.1.1.29
TF k141_94440 k141_94440_22 26433 27974 + HTH_AraC | HTH_AraC
TC k141_94440 k141_94440_23 27984 29774 + 8.A.59.2.1
sulfatase k141_94440 k141_94440_24 29761 31296 + S1_51
pfam k141_94440 k141_94440_25 31372 33399 - FtsX
TC k141_94440 k141_94440_26 33393 34166 - 3.A.1.134.12
Gene ID: k141_94440_17
Type: CAZyme
Location: 17730 - 19463 (-)
Gene ID: k141_94440_18
Type: CAZyme
Location: 19487 - 22306 (-)
Gene ID: k141_94440_19
Type: TC
Location: 22401 - 24158 (-)
Gene ID: k141_94440_20
Type: TC
Location: 24209 - 25096 (-)
Gene ID: k141_94440_21
Type: TC
Location: 25129 - 26088 (-)
Gene ID: k141_94440_22
Type: TF
Location: 26433 - 27974 (+)
Gene ID: k141_94440_23
Type: TC
Location: 27984 - 29774 (+)
Gene ID: k141_94440_24
Type: sulfatase
Location: 29761 - 31296 (+)
Gene ID: k141_94440_25
Type: pfam
Location: 31372 - 33399 (-)
Gene ID: k141_94440_26
Type: TC
Location: 33393 - 34166 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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