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Cluster: CGMR001923_CGC136

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_141583 k141_141583_10 7756 9753 + GH31_4
pfam k141_141583 k141_141583_11 9785 10489 + Hydrolase | Hydrolase_like | HAD_2
TF k141_141583 k141_141583_12 10476 11378 - HTH_AraC
CAZyme k141_141583 k141_141583_13 11758 13821 + GH127
NULL(UNKNOWN) k141_141583 k141_141583_14 14011 14967 + NULL(UNKNOWN)
[View Structural Homologs]
STP k141_141583 k141_141583_15 15056 16417 + TrkA_C | TrkA_C
TC k141_141583 k141_141583_16 16434 17870 + 2.A.38.1.1
pfam k141_141583 k141_141583_17 17962 18315 + Hpt
TC k141_141583 k141_141583_18 18350 19417 + 8.A.59.4.1
Gene ID: k141_141583_10
Type: CAZyme
Location: 7756 - 9753 (+)
Gene ID: k141_141583_11
Type: pfam
Location: 9785 - 10489 (+)
Gene ID: k141_141583_12
Type: TF
Location: 10476 - 11378 (-)
Gene ID: k141_141583_13
Type: CAZyme
Location: 11758 - 13821 (+)
Gene ID: k141_141583_14
Type:
Location: 14011 - 14967 (+)
Gene ID: k141_141583_15
Type: STP
Location: 15056 - 16417 (+)
Gene ID: k141_141583_16
Type: TC
Location: 16434 - 17870 (+)
Gene ID: k141_141583_17
Type: pfam
Location: 17962 - 18315 (+)
Gene ID: k141_141583_18
Type: TC
Location: 18350 - 19417 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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