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Cluster: CGMR001923_CGC127

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_184517 k141_184517_10 12798 14909 + 9.B.106.2.2
pfam k141_184517 k141_184517_11 14914 15789 + ABC_tran | MMR_HSR1 | RsgA_GTPase | RsgA_N
CAZyme k141_184517 k141_184517_12 15935 17821 - GH20
sulfatase k141_184517 k141_184517_13 17836 19281 - S1_46
TF k141_184517 k141_184517_14 19244 21484 - HTH_AraC | HTH_AraC
TC k141_184517 k141_184517_15 21551 23230 - 3.A.1.1.10
TC k141_184517 k141_184517_16 23266 24168 - 3.A.1.1.10
TC k141_184517 k141_184517_17 24183 25121 - 3.A.1.1.10
Gene ID: k141_184517_10
Type: TC
Location: 12798 - 14909 (+)
Gene ID: k141_184517_11
Type: pfam
Location: 14914 - 15789 (+)
Gene ID: k141_184517_12
Type: CAZyme
Location: 15935 - 17821 (-)
Gene ID: k141_184517_13
Type: sulfatase
Location: 17836 - 19281 (-)
Gene ID: k141_184517_14
Type: TF
Location: 19244 - 21484 (-)
Gene ID: k141_184517_15
Type: TC
Location: 21551 - 23230 (-)
Gene ID: k141_184517_16
Type: TC
Location: 23266 - 24168 (-)
Gene ID: k141_184517_17
Type: TC
Location: 24183 - 25121 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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