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Cluster: CGMR001923_CGC123

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_30041 k141_30041_2 134 2053 - GH129
TC k141_30041 k141_30041_3 2110 2988 - 3.A.1.1.10
TC k141_30041 k141_30041_4 3002 3985 - 3.A.1.1.10
TC k141_30041 k141_30041_5 4008 4727 - 3.A.1.1.10
STP k141_30041 k141_30041_6 4751 5707 - SBP_bac_1
TF k141_30041 k141_30041_7 5936 8212 - HTH_AraC
CAZyme k141_30041 k141_30041_8 8435 10456 - PL12_1
CAZyme k141_30041 k141_30041_9 10488 11666 - GH88
TF k141_30041 k141_30041_10 12059 12934 - HTH_AraC
TC k141_30041 k141_30041_11 13061 14431 - 2.A.66.1.28
Gene ID: k141_30041_2
Type: CAZyme
Location: 134 - 2053 (-)
Gene ID: k141_30041_3
Type: TC
Location: 2110 - 2988 (-)
Gene ID: k141_30041_4
Type: TC
Location: 3002 - 3985 (-)
Gene ID: k141_30041_5
Type: TC
Location: 4008 - 4727 (-)
Gene ID: k141_30041_6
Type: STP
Location: 4751 - 5707 (-)
Gene ID: k141_30041_7
Type: TF
Location: 5936 - 8212 (-)
Gene ID: k141_30041_8
Type: CAZyme
Location: 8435 - 10456 (-)
Gene ID: k141_30041_9
Type: CAZyme
Location: 10488 - 11666 (-)
Gene ID: k141_30041_10
Type: TF
Location: 12059 - 12934 (-)
Gene ID: k141_30041_11
Type: TC
Location: 13061 - 14431 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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