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Cluster: CGMR001923_CGC121

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_109506 k141_109506_9 14394 16199 - 8.A.59.2.1
STP k141_109506 k141_109506_10 16475 17827 + SBP_bac_1
TC k141_109506 k141_109506_11 17915 18802 + 3.A.1.1.20
TC k141_109506 k141_109506_12 18830 19684 + 3.A.1.1.34
sulfatase k141_109506 k141_109506_13 19702 21198 + S1_64
CAZyme k141_109506 k141_109506_14 21268 23946 - GH106
TF k141_109506 k141_109506_15 23943 25529 - HTH_AraC | HTH_AraC
TC k141_109506 k141_109506_16 25522 27318 - 8.A.59.2.1
TC k141_109506 k141_109506_17 27615 28532 + 3.A.1.1.29
TC k141_109506 k141_109506_18 28586 29479 + 3.A.1.1.29
NULL(UNKNOWN) k141_109506 k141_109506_19 29534 31321 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_109506 k141_109506_20 31528 32595 + LacI
CAZyme k141_109506 k141_109506_21 32638 34692 + GH42
NULL(UNKNOWN) k141_109506 k141_109506_22 35084 36010 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_109506 k141_109506_23 36150 36698 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_109506 k141_109506_24 36949 38952 - GH127
TC k141_109506 k141_109506_25 39045 40196 + 3.A.1.1.10
TC k141_109506 k141_109506_26 40207 41085 + 3.A.1.1.10
TC k141_109506 k141_109506_27 41218 42879 + 3.A.1.1.10
CAZyme k141_109506 k141_109506_28 42881 44692 + GH146
TF k141_109506 k141_109506_29 44724 47006 + HTH_AraC
NULL(UNKNOWN) k141_109506 k141_109506_30 47003 47884 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_109506 k141_109506_31 48294 49247 + GH43_22
CAZyme k141_109506 k141_109506_32 49316 50869 + GH43_35
Gene ID: k141_109506_9
Type: TC
Location: 14394 - 16199 (-)
Gene ID: k141_109506_10
Type: STP
Location: 16475 - 17827 (+)
Gene ID: k141_109506_11
Type: TC
Location: 17915 - 18802 (+)
Gene ID: k141_109506_12
Type: TC
Location: 18830 - 19684 (+)
Gene ID: k141_109506_13
Type: sulfatase
Location: 19702 - 21198 (+)
Gene ID: k141_109506_14
Type: CAZyme
Location: 21268 - 23946 (-)
Gene ID: k141_109506_15
Type: TF
Location: 23943 - 25529 (-)
Gene ID: k141_109506_16
Type: TC
Location: 25522 - 27318 (-)
Gene ID: k141_109506_17
Type: TC
Location: 27615 - 28532 (+)
Gene ID: k141_109506_18
Type: TC
Location: 28586 - 29479 (+)
Gene ID: k141_109506_19
Type:
Location: 29534 - 31321 (+)
Gene ID: k141_109506_20
Type: TF
Location: 31528 - 32595 (+)
Gene ID: k141_109506_21
Type: CAZyme
Location: 32638 - 34692 (+)
Gene ID: k141_109506_22
Type:
Location: 35084 - 36010 (-)
Gene ID: k141_109506_23
Type:
Location: 36150 - 36698 (-)
Gene ID: k141_109506_24
Type: CAZyme
Location: 36949 - 38952 (-)
Gene ID: k141_109506_25
Type: TC
Location: 39045 - 40196 (+)
Gene ID: k141_109506_26
Type: TC
Location: 40207 - 41085 (+)
Gene ID: k141_109506_27
Type: TC
Location: 41218 - 42879 (+)
Gene ID: k141_109506_28
Type: CAZyme
Location: 42881 - 44692 (+)
Gene ID: k141_109506_29
Type: TF
Location: 44724 - 47006 (+)
Gene ID: k141_109506_30
Type:
Location: 47003 - 47884 (+)
Gene ID: k141_109506_31
Type: CAZyme
Location: 48294 - 49247 (+)
Gene ID: k141_109506_32
Type: CAZyme
Location: 49316 - 50869 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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