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Cluster: CGMR001923_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_33207 k141_33207_9 10062 11117 + 3.A.1.14.16
TC k141_33207 k141_33207_10 11114 11872 + 3.A.1.14.7
pfam k141_33207 k141_33207_11 11884 12414 + FmdE
TF k141_33207 k141_33207_12 12806 13840 + LacI
CAZyme k141_33207 k141_33207_13 13922 15913 + GH31_7
TC k141_33207 k141_33207_14 16014 17363 + 3.A.1.1.41
TC k141_33207 k141_33207_15 17523 18428 + 3.A.1.1.11
TC k141_33207 k141_33207_16 18418 19242 + 3.A.1.1.36
CAZyme k141_33207 k141_33207_17 19257 21248 + GH31_1
pfam k141_33207 k141_33207_18 21375 22430 + Methyltransf_5
TC k141_33207 k141_33207_19 22453 24189 - 3.A.1.106.13
TC k141_33207 k141_33207_20 24186 25967 - 3.A.1.210.6
STP k141_33207 k141_33207_21 26363 27742 + Fer4
pfam k141_33207 k141_33207_22 27798 28337 + Rubrerythrin | RUBY_RBDX
TC k141_33207 k141_33207_23 28469 28798 - 2.A.78.1.1
TC k141_33207 k141_33207_24 28795 29487 - 2.A.78.1.1
Gene ID: k141_33207_9
Type: TC
Location: 10062 - 11117 (+)
Gene ID: k141_33207_10
Type: TC
Location: 11114 - 11872 (+)
Gene ID: k141_33207_11
Type: pfam
Location: 11884 - 12414 (+)
Gene ID: k141_33207_12
Type: TF
Location: 12806 - 13840 (+)
Gene ID: k141_33207_13
Type: CAZyme
Location: 13922 - 15913 (+)
Gene ID: k141_33207_14
Type: TC
Location: 16014 - 17363 (+)
Gene ID: k141_33207_15
Type: TC
Location: 17523 - 18428 (+)
Gene ID: k141_33207_16
Type: TC
Location: 18418 - 19242 (+)
Gene ID: k141_33207_17
Type: CAZyme
Location: 19257 - 21248 (+)
Gene ID: k141_33207_18
Type: pfam
Location: 21375 - 22430 (+)
Gene ID: k141_33207_19
Type: TC
Location: 22453 - 24189 (-)
Gene ID: k141_33207_20
Type: TC
Location: 24186 - 25967 (-)
Gene ID: k141_33207_21
Type: STP
Location: 26363 - 27742 (+)
Gene ID: k141_33207_22
Type: pfam
Location: 27798 - 28337 (+)
Gene ID: k141_33207_23
Type: TC
Location: 28469 - 28798 (-)
Gene ID: k141_33207_24
Type: TC
Location: 28795 - 29487 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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