dbCAN Logo

Cluster: CGMR001923_CGC119

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_92196 k141_92196_20 17285 18673 + GH165
CAZyme k141_92196 k141_92196_21 18670 20100 + GH165
pfam k141_92196 k141_92196_22 20121 21182 + Lipase_GDSL_2
STP k141_92196 k141_92196_23 21458 23164 + SBP_bac_1
TC k141_92196 k141_92196_24 23215 24129 + 3.A.1.1.10
TC k141_92196 k141_92196_25 24142 25044 + 3.A.1.1.29
CAZyme k141_92196 k141_92196_26 25081 26412 + GH29
TC k141_92196 k141_92196_27 26575 28206 + 3.B.1.1.2
TC k141_92196 k141_92196_28 28413 35795 + 4.C.1.1.6
TC k141_92196 k141_92196_29 35818 37689 + 2.A.21.9.1
TC k141_92196 k141_92196_30 37696 39189 + 8.A.59.4.2
TC k141_92196 k141_92196_31 39193 40851 + 4.C.1.1.4
Gene ID: k141_92196_20
Type: CAZyme
Location: 17285 - 18673 (+)
Gene ID: k141_92196_21
Type: CAZyme
Location: 18670 - 20100 (+)
Gene ID: k141_92196_22
Type: pfam
Location: 20121 - 21182 (+)
Gene ID: k141_92196_23
Type: STP
Location: 21458 - 23164 (+)
Gene ID: k141_92196_24
Type: TC
Location: 23215 - 24129 (+)
Gene ID: k141_92196_25
Type: TC
Location: 24142 - 25044 (+)
Gene ID: k141_92196_26
Type: CAZyme
Location: 25081 - 26412 (+)
Gene ID: k141_92196_27
Type: TC
Location: 26575 - 28206 (+)
Gene ID: k141_92196_28
Type: TC
Location: 28413 - 35795 (+)
Gene ID: k141_92196_29
Type: TC
Location: 35818 - 37689 (+)
Gene ID: k141_92196_30
Type: TC
Location: 37696 - 39189 (+)
Gene ID: k141_92196_31
Type: TC
Location: 39193 - 40851 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List