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Cluster: CGMR001923_CGC106

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_59142 k141_59142_23 32339 33136 - CE1
peptidase k141_59142 k141_59142_24 33161 34021 - S09.UPB
TC k141_59142 k141_59142_25 34073 34963 - 3.A.1.1.29
TC k141_59142 k141_59142_26 34973 35896 - 3.A.1.1.10
CAZyme k141_59142 k141_59142_27 35958 38807 - GH3
TC k141_59142 k141_59142_28 38827 40110 - 2.A.1.46.5
STP k141_59142 k141_59142_29 40088 41635 - SBP_bac_1
CAZyme k141_59142 k141_59142_30 41833 44298 - GH51_2
CAZyme k141_59142 k141_59142_31 44325 45854 - GH39
peptidase k141_59142 k141_59142_32 45884 47065 - S12.UPW
CAZyme k141_59142 k141_59142_33 47104 48750 - GH43_27
peptidase k141_59142 k141_59142_34 48784 50286 - S09.UPW
CAZyme k141_59142 k141_59142_35 50300 51808 - GH51_1
CAZyme k141_59142 k141_59142_36 51829 54816 - GH10
STP k141_59142 k141_59142_37 54962 56758 - SBP_bac_1
TC k141_59142 k141_59142_38 56871 57794 - 3.A.1.1.29
TC k141_59142 k141_59142_39 57811 58731 - 3.A.1.1.10
TF k141_59142 k141_59142_40 59143 60201 - LacI
TC k141_59142 k141_59142_41 60529 62358 + 9.B.33.1.1
TF k141_59142 k141_59142_42 62381 63994 + HTH_AraC
TC k141_59142 k141_59142_43 64216 65922 + 3.A.1.1.29
TC k141_59142 k141_59142_44 65989 66933 + 3.A.1.1.29
TC k141_59142 k141_59142_45 66946 67869 + 3.A.1.1.29
CAZyme k141_59142 k141_59142_46 67919 69124 + GH8
TC k141_59142 k141_59142_47 69142 70410 - 2.A.37.3.3
Gene ID: k141_59142_23
Type: CAZyme
Location: 32339 - 33136 (-)
Gene ID: k141_59142_24
Type: peptidase
Location: 33161 - 34021 (-)
Gene ID: k141_59142_25
Type: TC
Location: 34073 - 34963 (-)
Gene ID: k141_59142_26
Type: TC
Location: 34973 - 35896 (-)
Gene ID: k141_59142_27
Type: CAZyme
Location: 35958 - 38807 (-)
Gene ID: k141_59142_28
Type: TC
Location: 38827 - 40110 (-)
Gene ID: k141_59142_29
Type: STP
Location: 40088 - 41635 (-)
Gene ID: k141_59142_30
Type: CAZyme
Location: 41833 - 44298 (-)
Gene ID: k141_59142_31
Type: CAZyme
Location: 44325 - 45854 (-)
Gene ID: k141_59142_32
Type: peptidase
Location: 45884 - 47065 (-)
Gene ID: k141_59142_33
Type: CAZyme
Location: 47104 - 48750 (-)
Gene ID: k141_59142_34
Type: peptidase
Location: 48784 - 50286 (-)
Gene ID: k141_59142_35
Type: CAZyme
Location: 50300 - 51808 (-)
Gene ID: k141_59142_36
Type: CAZyme
Location: 51829 - 54816 (-)
Gene ID: k141_59142_37
Type: STP
Location: 54962 - 56758 (-)
Gene ID: k141_59142_38
Type: TC
Location: 56871 - 57794 (-)
Gene ID: k141_59142_39
Type: TC
Location: 57811 - 58731 (-)
Gene ID: k141_59142_40
Type: TF
Location: 59143 - 60201 (-)
Gene ID: k141_59142_41
Type: TC
Location: 60529 - 62358 (+)
Gene ID: k141_59142_42
Type: TF
Location: 62381 - 63994 (+)
Gene ID: k141_59142_43
Type: TC
Location: 64216 - 65922 (+)
Gene ID: k141_59142_44
Type: TC
Location: 65989 - 66933 (+)
Gene ID: k141_59142_45
Type: TC
Location: 66946 - 67869 (+)
Gene ID: k141_59142_46
Type: CAZyme
Location: 67919 - 69124 (+)
Gene ID: k141_59142_47
Type: TC
Location: 69142 - 70410 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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