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Cluster: CGMR001923_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_96150 k141_96150_16 20506 21336 - 3.A.1.1.11
TC k141_96150 k141_96150_17 21333 22226 - 3.A.1.1.11
TF k141_96150 k141_96150_18 22421 23968 + HTH_AraC | HTH_AraC
TC k141_96150 k141_96150_19 23958 25676 + 8.A.59.2.1
CAZyme k141_96150 k141_96150_20 25723 27729 - GH120
NULL(UNKNOWN) k141_96150 k141_96150_21 27763 28641 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_96150 k141_96150_22 28726 30333 - 3.A.1.1.10
TC k141_96150 k141_96150_23 30432 31301 - 3.A.1.1.10
TC k141_96150 k141_96150_24 31313 32266 - 3.A.1.1.10
Gene ID: k141_96150_16
Type: TC
Location: 20506 - 21336 (-)
Gene ID: k141_96150_17
Type: TC
Location: 21333 - 22226 (-)
Gene ID: k141_96150_18
Type: TF
Location: 22421 - 23968 (+)
Gene ID: k141_96150_19
Type: TC
Location: 23958 - 25676 (+)
Gene ID: k141_96150_20
Type: CAZyme
Location: 25723 - 27729 (-)
Gene ID: k141_96150_21
Type:
Location: 27763 - 28641 (-)
Gene ID: k141_96150_22
Type: TC
Location: 28726 - 30333 (-)
Gene ID: k141_96150_23
Type: TC
Location: 30432 - 31301 (-)
Gene ID: k141_96150_24
Type: TC
Location: 31313 - 32266 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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