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Cluster: CGMR001822_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_6138 k141_6138_1 857 1231 + 1.A.43.1.11
pfam k141_6138 k141_6138_2 1287 1742 - DUF441
TC k141_6138 k141_6138_3 1958 2758 + 3.A.1.3.27
TC k141_6138 k141_6138_4 2799 3674 - 2.A.7.3.12
pfam k141_6138 k141_6138_5 3835 4476 + Flavin_Reduct | RUBY_RBDX
pfam k141_6138 k141_6138_6 4563 4982 - YgbA_NO
TC k141_6138 k141_6138_7 5147 6208 + 3.A.1.24.1
TC k141_6138 k141_6138_8 6177 6830 + 3.A.1.24.5
TC k141_6138 k141_6138_9 6858 7673 + 3.A.1.24.5
CAZyme k141_6138 k141_6138_10 7812 9731 + GH13_4
TC k141_6138 k141_6138_11 9797 11104 - 9.A.40.2.2
TC k141_6138 k141_6138_12 11531 12835 + 2.A.45.2.4
Gene ID: k141_6138_1
Type: TC
Location: 857 - 1231 (+)
Gene ID: k141_6138_2
Type: pfam
Location: 1287 - 1742 (-)
Gene ID: k141_6138_3
Type: TC
Location: 1958 - 2758 (+)
Gene ID: k141_6138_4
Type: TC
Location: 2799 - 3674 (-)
Gene ID: k141_6138_5
Type: pfam
Location: 3835 - 4476 (+)
Gene ID: k141_6138_6
Type: pfam
Location: 4563 - 4982 (-)
Gene ID: k141_6138_7
Type: TC
Location: 5147 - 6208 (+)
Gene ID: k141_6138_8
Type: TC
Location: 6177 - 6830 (+)
Gene ID: k141_6138_9
Type: TC
Location: 6858 - 7673 (+)
Gene ID: k141_6138_10
Type: CAZyme
Location: 7812 - 9731 (+)
Gene ID: k141_6138_11
Type: TC
Location: 9797 - 11104 (-)
Gene ID: k141_6138_12
Type: TC
Location: 11531 - 12835 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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