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Cluster: CGMR001822_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_10358 k141_10358_1 79 2343 + GT35
STP k141_10358 k141_10358_2 2437 3243 - NUDIX
TC k141_10358 k141_10358_3 3363 5438 - 4.A.1.1.8
CAZyme k141_10358 k141_10358_4 5593 6924 - GH4
TF k141_10358 k141_10358_5 7238 7705 - MarR
TC k141_10358 k141_10358_6 7788 8972 - 2.A.1.46.5
TF k141_10358 k141_10358_7 9204 9965 - HTH_6
NULL(UNKNOWN) k141_10358 k141_10358_8 10126 10314 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_10358 k141_10358_9 10364 12259 - 9.A.8.1.6
Gene ID: k141_10358_1
Type: CAZyme
Location: 79 - 2343 (+)
Gene ID: k141_10358_2
Type: STP
Location: 2437 - 3243 (-)
Gene ID: k141_10358_3
Type: TC
Location: 3363 - 5438 (-)
Gene ID: k141_10358_4
Type: CAZyme
Location: 5593 - 6924 (-)
Gene ID: k141_10358_5
Type: TF
Location: 7238 - 7705 (-)
Gene ID: k141_10358_6
Type: TC
Location: 7788 - 8972 (-)
Gene ID: k141_10358_7
Type: TF
Location: 9204 - 9965 (-)
Gene ID: k141_10358_8
Type:
Location: 10126 - 10314 (-)
Gene ID: k141_10358_9
Type: TC
Location: 10364 - 12259 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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