Cluster: CGMR001678_CGC9
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR001678
- CGC Family ID: CGCFAM_04198
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_211466 | k141_211466_5 | 8617 | 9594 | + | 3.A.1.1.10 |
| TC | k141_211466 | k141_211466_6 | 9609 | 10508 | + | 3.A.1.1.10 |
| CAZyme | k141_211466 | k141_211466_7 | 10618 | 14388 | + | CBM32 |
| STP | k141_211466 | k141_211466_8 | 14391 | 16037 | + | SBP_bac_1 |
| CAZyme | k141_211466 | k141_211466_9 | 16067 | 18040 | + | CBM32 |
| CAZyme | k141_211466 | k141_211466_10 | 18057 | 21968 | + | CBM32 | CBM32 |
| CAZyme | k141_211466 | k141_211466_11 | 22035 | 24581 | + | GH20 |
| CAZyme | k141_211466 | k141_211466_12 | 24604 | 25572 | + | GH179 |
Gene ID: k141_211466_5
Type: TC
Location: 8617 - 9594 (+)
Type: TC
Location: 8617 - 9594 (+)
Gene ID: k141_211466_6
Type: TC
Location: 9609 - 10508 (+)
Type: TC
Location: 9609 - 10508 (+)
Gene ID: k141_211466_7
Type: CAZyme
Location: 10618 - 14388 (+)
Type: CAZyme
Location: 10618 - 14388 (+)
Gene ID: k141_211466_8
Type: STP
Location: 14391 - 16037 (+)
Type: STP
Location: 14391 - 16037 (+)
Gene ID: k141_211466_9
Type: CAZyme
Location: 16067 - 18040 (+)
Type: CAZyme
Location: 16067 - 18040 (+)
Gene ID: k141_211466_10
Type: CAZyme
Location: 18057 - 21968 (+)
Type: CAZyme
Location: 18057 - 21968 (+)
Gene ID: k141_211466_11
Type: CAZyme
Location: 22035 - 24581 (+)
Type: CAZyme
Location: 22035 - 24581 (+)
Gene ID: k141_211466_12
Type: CAZyme
Location: 24604 - 25572 (+)
Type: CAZyme
Location: 24604 - 25572 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA9506
Genus
RGIG1666
Species
RGIG1666 sp949299615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.