Cluster: CGMR001678_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR001678
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_40723 | k141_40723_7 | 8697 | 13358 | + | CBM96 | CE20 |
| pfam | k141_40723 | k141_40723_8 | 13370 | 15961 | + | Polysacc_deac_1 | aBig_2 | CBM96 | CBM96 |
| TF | k141_40723 | k141_40723_9 | 16273 | 18543 | + | HTH_AraC | HTH_AraC |
| TC | k141_40723 | k141_40723_10 | 18705 | 19649 | + | 3.A.1.1.10 |
| TC | k141_40723 | k141_40723_11 | 19667 | 20614 | + | 3.A.1.1.10 |
| TC | k141_40723 | k141_40723_12 | 20653 | 22176 | + | 3.A.1.1.9 |
Gene ID: k141_40723_7
Type: CAZyme
Location: 8697 - 13358 (+)
Type: CAZyme
Location: 8697 - 13358 (+)
Gene ID: k141_40723_8
Type: pfam
Location: 13370 - 15961 (+)
Type: pfam
Location: 13370 - 15961 (+)
Gene ID: k141_40723_9
Type: TF
Location: 16273 - 18543 (+)
Type: TF
Location: 16273 - 18543 (+)
Gene ID: k141_40723_10
Type: TC
Location: 18705 - 19649 (+)
Type: TC
Location: 18705 - 19649 (+)
Gene ID: k141_40723_11
Type: TC
Location: 19667 - 20614 (+)
Type: TC
Location: 19667 - 20614 (+)
Gene ID: k141_40723_12
Type: TC
Location: 20653 - 22176 (+)
Type: TC
Location: 20653 - 22176 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA9506
Genus
RGIG1666
Species
RGIG1666 sp949299615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.