Cluster: CGMR001678_CGC35
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR001678
- CGC Family ID: CGCFAM_00244
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_134793 | k141_134793_6 | 7379 | 10462 | + | GH141 |
| pfam | k141_134793 | k141_134793_7 | 10506 | 13496 | + | SLH | SLH | SLH | F5_F8_type_C |
| pfam | k141_134793 | k141_134793_8 | 13493 | 16690 | + | SLH | SLH | F5_F8_type_C | F5_F8_type_C_2 |
| TC | k141_134793 | k141_134793_9 | 17013 | 17939 | + | 3.A.1.1.29 |
| TC | k141_134793 | k141_134793_10 | 17951 | 18871 | + | 3.A.1.1.29 |
| NULL(UNKNOWN) | k141_134793 | k141_134793_11 | 18927 | 20684 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_134793 | k141_134793_12 | 20758 | 22689 | + | GH151 |
Gene ID: k141_134793_6
Type: CAZyme
Location: 7379 - 10462 (+)
Type: CAZyme
Location: 7379 - 10462 (+)
Gene ID: k141_134793_7
Type: pfam
Location: 10506 - 13496 (+)
Type: pfam
Location: 10506 - 13496 (+)
Gene ID: k141_134793_8
Type: pfam
Location: 13493 - 16690 (+)
Type: pfam
Location: 13493 - 16690 (+)
Gene ID: k141_134793_9
Type: TC
Location: 17013 - 17939 (+)
Type: TC
Location: 17013 - 17939 (+)
Gene ID: k141_134793_10
Type: TC
Location: 17951 - 18871 (+)
Type: TC
Location: 17951 - 18871 (+)
Gene ID: k141_134793_11
Type:
Location: 18927 - 20684 (+)
Type:
Location: 18927 - 20684 (+)
Gene ID: k141_134793_12
Type: CAZyme
Location: 20758 - 22689 (+)
Type: CAZyme
Location: 20758 - 22689 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA9506
Genus
RGIG1666
Species
RGIG1666 sp949299615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.