Cluster: CGMR001191_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR001191
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_138576 | k141_138576_13 | 13475 | 14350 | - | GT2 |
| pfam | k141_138576 | k141_138576_14 | 14520 | 16148 | + | LytR_cpsA_psr | LytR_C |
| pfam | k141_138576 | k141_138576_15 | 16203 | 16844 | + | AMP-binding |
| TC | k141_138576 | k141_138576_16 | 16858 | 17919 | + | 3.A.1.1.23 |
| TC | k141_138576 | k141_138576_17 | 18005 | 19273 | + | 3.A.1.1.31 |
| TC | k141_138576 | k141_138576_18 | 19396 | 20394 | + | 3.A.1.1.19 |
| TC | k141_138576 | k141_138576_19 | 20407 | 21273 | + | 3.A.1.1.41 |
Gene ID: k141_138576_13
Type: CAZyme
Location: 13475 - 14350 (-)
Type: CAZyme
Location: 13475 - 14350 (-)
Gene ID: k141_138576_14
Type: pfam
Location: 14520 - 16148 (+)
Type: pfam
Location: 14520 - 16148 (+)
Gene ID: k141_138576_15
Type: pfam
Location: 16203 - 16844 (+)
Type: pfam
Location: 16203 - 16844 (+)
Gene ID: k141_138576_16
Type: TC
Location: 16858 - 17919 (+)
Type: TC
Location: 16858 - 17919 (+)
Gene ID: k141_138576_17
Type: TC
Location: 18005 - 19273 (+)
Type: TC
Location: 18005 - 19273 (+)
Gene ID: k141_138576_18
Type: TC
Location: 19396 - 20394 (+)
Type: TC
Location: 19396 - 20394 (+)
Gene ID: k141_138576_19
Type: TC
Location: 20407 - 21273 (+)
Type: TC
Location: 20407 - 21273 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Corynebacterium
Species
Corynebacterium argentoratense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.