Cluster: CGMR001191_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR001191
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_123009 | k141_123009_13 | 12901 | 14469 | + | 8.A.59.2.2 |
| pfam | k141_123009 | k141_123009_14 | 14516 | 15439 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd |
| TC | k141_123009 | k141_123009_15 | 15436 | 16335 | - | 5.A.1.2.2 |
| pfam | k141_123009 | k141_123009_16 | 16335 | 17201 | - | DSBA | Thioredoxin_4 |
| pfam | k141_123009 | k141_123009_17 | 17271 | 17627 | - | DUF2304 |
| CAZyme | k141_123009 | k141_123009_18 | 17624 | 18316 | - | GT2 |
| CAZyme | k141_123009 | k141_123009_19 | 18378 | 19427 | + | GT2 |
Gene ID: k141_123009_13
Type: TC
Location: 12901 - 14469 (+)
Type: TC
Location: 12901 - 14469 (+)
Gene ID: k141_123009_14
Type: pfam
Location: 14516 - 15439 (+)
Type: pfam
Location: 14516 - 15439 (+)
Gene ID: k141_123009_15
Type: TC
Location: 15436 - 16335 (-)
Type: TC
Location: 15436 - 16335 (-)
Gene ID: k141_123009_16
Type: pfam
Location: 16335 - 17201 (-)
Type: pfam
Location: 16335 - 17201 (-)
Gene ID: k141_123009_17
Type: pfam
Location: 17271 - 17627 (-)
Type: pfam
Location: 17271 - 17627 (-)
Gene ID: k141_123009_18
Type: CAZyme
Location: 17624 - 18316 (-)
Type: CAZyme
Location: 17624 - 18316 (-)
Gene ID: k141_123009_19
Type: CAZyme
Location: 18378 - 19427 (+)
Type: CAZyme
Location: 18378 - 19427 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Corynebacterium
Species
Corynebacterium argentoratense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.