Cluster: CGMR001159_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR001159
- CGC Family ID: CGCFAM_01360
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_34209 | k141_34209_16 | 11883 | 12716 | - | 3.A.1.1.18 |
| TC | k141_34209 | k141_34209_17 | 12728 | 13609 | - | 3.A.1.1.36 |
| STP | k141_34209 | k141_34209_18 | 13627 | 14937 | - | SBP_bac_1 |
| CAZyme | k141_34209 | k141_34209_19 | 15052 | 16350 | - | GH29 |
| TC | k141_34209 | k141_34209_20 | 16586 | 18298 | + | 8.A.59.2.1 |
Gene ID: k141_34209_16
Type: TC
Location: 11883 - 12716 (-)
Type: TC
Location: 11883 - 12716 (-)
Gene ID: k141_34209_17
Type: TC
Location: 12728 - 13609 (-)
Type: TC
Location: 12728 - 13609 (-)
Gene ID: k141_34209_18
Type: STP
Location: 13627 - 14937 (-)
Type: STP
Location: 13627 - 14937 (-)
Gene ID: k141_34209_19
Type: CAZyme
Location: 15052 - 16350 (-)
Type: CAZyme
Location: 15052 - 16350 (-)
Gene ID: k141_34209_20
Type: TC
Location: 16586 - 18298 (+)
Type: TC
Location: 16586 - 18298 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
CAG-274
Genus
Tyzzerella
Species
Tyzzerella sp018371275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.