Cluster: CGMR001159_CGC3
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR001159
- CGC Family ID: CGCFAM_00209
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_34039 | k141_34039_11 | 10000 | 11421 | - | 4.A.1.2.7 |
| STP | k141_34039 | k141_34039_12 | 11433 | 12323 | - | SIS |
| CAZyme | k141_34039 | k141_34039_13 | 12326 | 13387 | - | GH170 |
| peptidase | k141_34039 | k141_34039_14 | 13627 | 15570 | + | S12.UPW |
| pfam | k141_34039 | k141_34039_15 | 15914 | 16219 | + | Thiamine_BP |
| TC | k141_34039 | k141_34039_16 | 16191 | 16946 | + | 3.A.1.17.8 |
| TC | k141_34039 | k141_34039_17 | 16958 | 17971 | + | 3.A.1.17.8 |
| TC | k141_34039 | k141_34039_18 | 18029 | 18775 | + | 3.A.1.17.13 |
Gene ID: k141_34039_11
Type: TC
Location: 10000 - 11421 (-)
Type: TC
Location: 10000 - 11421 (-)
Gene ID: k141_34039_12
Type: STP
Location: 11433 - 12323 (-)
Type: STP
Location: 11433 - 12323 (-)
Gene ID: k141_34039_13
Type: CAZyme
Location: 12326 - 13387 (-)
Type: CAZyme
Location: 12326 - 13387 (-)
Gene ID: k141_34039_14
Type: peptidase
Location: 13627 - 15570 (+)
Type: peptidase
Location: 13627 - 15570 (+)
Gene ID: k141_34039_15
Type: pfam
Location: 15914 - 16219 (+)
Type: pfam
Location: 15914 - 16219 (+)
Gene ID: k141_34039_16
Type: TC
Location: 16191 - 16946 (+)
Type: TC
Location: 16191 - 16946 (+)
Gene ID: k141_34039_17
Type: TC
Location: 16958 - 17971 (+)
Type: TC
Location: 16958 - 17971 (+)
Gene ID: k141_34039_18
Type: TC
Location: 18029 - 18775 (+)
Type: TC
Location: 18029 - 18775 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
CAG-274
Genus
Tyzzerella
Species
Tyzzerella sp018371275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.