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Cluster: CGMR000670_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_22570 k141_22570_11 8403 10736 + 3.A.1.135.6
TC k141_22570 k141_22570_12 10729 12567 + 3.A.1.135.6
TF k141_22570 k141_22570_13 12897 13748 + HTH_AraC
TC k141_22570 k141_22570_14 13949 15112 + 2.A.86.1.8
TF k141_22570 k141_22570_15 15250 15900 + Trans_reg_C
STP k141_22570 k141_22570_16 15893 17278 + HATPase_c | HisKA
CAZyme k141_22570 k141_22570_17 17487 18392 + GH73
pfam k141_22570 k141_22570_18 18516 19898 - CW_binding_2 | CW_binding_2 | CW_binding_2 | 3D | Choline_bind_3
pfam k141_22570 k141_22570_19 20295 23456 - SNF2-rel_dom | DEAD | Helicase_C | ResIII | SNF2_assoc
TC k141_22570 k141_22570_20 23669 25786 + 5.A.3.5.2
Gene ID: k141_22570_11
Type: TC
Location: 8403 - 10736 (+)
Gene ID: k141_22570_12
Type: TC
Location: 10729 - 12567 (+)
Gene ID: k141_22570_13
Type: TF
Location: 12897 - 13748 (+)
Gene ID: k141_22570_14
Type: TC
Location: 13949 - 15112 (+)
Gene ID: k141_22570_15
Type: TF
Location: 15250 - 15900 (+)
Gene ID: k141_22570_16
Type: STP
Location: 15893 - 17278 (+)
Gene ID: k141_22570_17
Type: CAZyme
Location: 17487 - 18392 (+)
Gene ID: k141_22570_18
Type: pfam
Location: 18516 - 19898 (-)
Gene ID: k141_22570_19
Type: pfam
Location: 20295 - 23456 (-)
Gene ID: k141_22570_20
Type: TC
Location: 23669 - 25786 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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