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Cluster: CGMR000393_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_82528 k141_82528_6 3109 5370 + GH36
pfam k141_82528 k141_82528_7 5379 6254 + ROK
pfam k141_82528 k141_82528_8 6517 7695 + GlcNAc_2-epim
CAZyme k141_82528 k141_82528_9 7719 8654 + GH113
STP k141_82528 k141_82528_10 8672 9967 + SBP_bac_1
TC k141_82528 k141_82528_11 10041 10913 + 3.A.1.1.28
TC k141_82528 k141_82528_12 10918 11772 + 3.A.1.1.27
NULL(UNKNOWN) k141_82528 k141_82528_13 11778 12341 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_82528 k141_82528_14 12359 13762 + GH1
CAZyme k141_82528 k141_82528_15 13781 14767 + CE7
Gene ID: k141_82528_6
Type: CAZyme
Location: 3109 - 5370 (+)
Gene ID: k141_82528_7
Type: pfam
Location: 5379 - 6254 (+)
Gene ID: k141_82528_8
Type: pfam
Location: 6517 - 7695 (+)
Gene ID: k141_82528_9
Type: CAZyme
Location: 7719 - 8654 (+)
Gene ID: k141_82528_10
Type: STP
Location: 8672 - 9967 (+)
Gene ID: k141_82528_11
Type: TC
Location: 10041 - 10913 (+)
Gene ID: k141_82528_12
Type: TC
Location: 10918 - 11772 (+)
Gene ID: k141_82528_13
Type:
Location: 11778 - 12341 (+)
Gene ID: k141_82528_14
Type: CAZyme
Location: 12359 - 13762 (+)
Gene ID: k141_82528_15
Type: CAZyme
Location: 13781 - 14767 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Aerococcaceae
→
Genus
Fundicoccus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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