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Cluster: CGMR000393_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_361474 k141_361474_3 2649 4025 + GH4
CAZyme k141_361474 k141_361474_4 4073 5398 + GH1
CAZyme k141_361474 k141_361474_5 5414 6532 + GH170
TF k141_361474 k141_361474_6 6529 8544 + HTH_11 | Mga
TC k141_361474 k141_361474_7 8567 8878 + 4.A.3.2.8
TC k141_361474 k141_361474_8 8881 9201 + 4.A.3.2.8
pfam k141_361474 k141_361474_9 9221 9646 + DUF3284
CAZyme k141_361474 k141_361474_10 9660 11081 + GH1
TC k141_361474 k141_361474_11 11099 12496 + 4.A.3.2.4
Gene ID: k141_361474_3
Type: CAZyme
Location: 2649 - 4025 (+)
Gene ID: k141_361474_4
Type: CAZyme
Location: 4073 - 5398 (+)
Gene ID: k141_361474_5
Type: CAZyme
Location: 5414 - 6532 (+)
Gene ID: k141_361474_6
Type: TF
Location: 6529 - 8544 (+)
Gene ID: k141_361474_7
Type: TC
Location: 8567 - 8878 (+)
Gene ID: k141_361474_8
Type: TC
Location: 8881 - 9201 (+)
Gene ID: k141_361474_9
Type: pfam
Location: 9221 - 9646 (+)
Gene ID: k141_361474_10
Type: CAZyme
Location: 9660 - 11081 (+)
Gene ID: k141_361474_11
Type: TC
Location: 11099 - 12496 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Aerococcaceae
→
Genus
Fundicoccus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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