Cluster: CGMR000393_CGC24
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR000393
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_8607 | k141_8607_1 | 3 | 890 | - | GH125 |
| CAZyme | k141_8607 | k141_8607_2 | 1109 | 2887 | - | GH35 |
| STP | k141_8607 | k141_8607_3 | 3014 | 4618 | - | SBP_bac_1 |
| TC | k141_8607 | k141_8607_4 | 4647 | 5576 | - | 3.A.1.1.10 |
| TC | k141_8607 | k141_8607_5 | 5601 | 6563 | - | 3.A.1.1.10 |
| TF | k141_8607 | k141_8607_6 | 6964 | 9255 | - | HTH_AraC |
| pfam | k141_8607 | k141_8607_7 | 9287 | 9925 | - | DUF624 |
| CAZyme | k141_8607 | k141_8607_8 | 10141 | 11439 | - | GH29 |
| NULL(UNKNOWN) | k141_8607 | k141_8607_9 | 11452 | 11931 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_8607 | k141_8607_10 | 11964 | 13856 | - | GH20 |
| CAZyme | k141_8607 | k141_8607_11 | 13984 | 15015 | - | GH20 |
| NULL(UNKNOWN) | k141_8607 | k141_8607_12 | 15207 | 15449 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_8607 | k141_8607_13 | 15618 | 16514 | + | EamA | EamA |
| TC | k141_8607 | k141_8607_14 | 16706 | 17326 | - | 2.A.53.3.8 |
Gene ID: k141_8607_1
Type: CAZyme
Location: 3 - 890 (-)
Type: CAZyme
Location: 3 - 890 (-)
Gene ID: k141_8607_2
Type: CAZyme
Location: 1109 - 2887 (-)
Type: CAZyme
Location: 1109 - 2887 (-)
Gene ID: k141_8607_3
Type: STP
Location: 3014 - 4618 (-)
Type: STP
Location: 3014 - 4618 (-)
Gene ID: k141_8607_4
Type: TC
Location: 4647 - 5576 (-)
Type: TC
Location: 4647 - 5576 (-)
Gene ID: k141_8607_5
Type: TC
Location: 5601 - 6563 (-)
Type: TC
Location: 5601 - 6563 (-)
Gene ID: k141_8607_6
Type: TF
Location: 6964 - 9255 (-)
Type: TF
Location: 6964 - 9255 (-)
Gene ID: k141_8607_7
Type: pfam
Location: 9287 - 9925 (-)
Type: pfam
Location: 9287 - 9925 (-)
Gene ID: k141_8607_8
Type: CAZyme
Location: 10141 - 11439 (-)
Type: CAZyme
Location: 10141 - 11439 (-)
Gene ID: k141_8607_9
Type:
Location: 11452 - 11931 (-)
Type:
Location: 11452 - 11931 (-)
Gene ID: k141_8607_10
Type: CAZyme
Location: 11964 - 13856 (-)
Type: CAZyme
Location: 11964 - 13856 (-)
Gene ID: k141_8607_11
Type: CAZyme
Location: 13984 - 15015 (-)
Type: CAZyme
Location: 13984 - 15015 (-)
Gene ID: k141_8607_12
Type:
Location: 15207 - 15449 (+)
Type:
Location: 15207 - 15449 (+)
Gene ID: k141_8607_13
Type: pfam
Location: 15618 - 16514 (+)
Type: pfam
Location: 15618 - 16514 (+)
Gene ID: k141_8607_14
Type: TC
Location: 16706 - 17326 (-)
Type: TC
Location: 16706 - 17326 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Aerococcaceae
Genus
Fundicoccus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.