Cluster: CGMR000393_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR000393
- CGC Family ID: CGCFAM_00277
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_6944 | k141_6944_8 | 6649 | 7635 | + | 8.A.5.1.3 |
| STP | k141_6944 | k141_6944_9 | 7933 | 9195 | + | SBP_bac_1 |
| TC | k141_6944 | k141_6944_10 | 9288 | 10181 | + | 3.A.1.1.7 |
| TC | k141_6944 | k141_6944_11 | 10187 | 11017 | + | 3.A.1.1.36 |
| TF | k141_6944 | k141_6944_12 | 11028 | 11867 | - | HTH_AraC | HTH_AraC |
| CAZyme | k141_6944 | k141_6944_13 | 12051 | 13361 | + | GH4 |
Gene ID: k141_6944_8
Type: TC
Location: 6649 - 7635 (+)
Type: TC
Location: 6649 - 7635 (+)
Gene ID: k141_6944_9
Type: STP
Location: 7933 - 9195 (+)
Type: STP
Location: 7933 - 9195 (+)
Gene ID: k141_6944_10
Type: TC
Location: 9288 - 10181 (+)
Type: TC
Location: 9288 - 10181 (+)
Gene ID: k141_6944_11
Type: TC
Location: 10187 - 11017 (+)
Type: TC
Location: 10187 - 11017 (+)
Gene ID: k141_6944_12
Type: TF
Location: 11028 - 11867 (-)
Type: TF
Location: 11028 - 11867 (-)
Gene ID: k141_6944_13
Type: CAZyme
Location: 12051 - 13361 (+)
Type: CAZyme
Location: 12051 - 13361 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Aerococcaceae
Genus
Fundicoccus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.