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Cluster: CGMR000096_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_189387 k141_189387_2 953 1561 - 9.B.18.1.2
CAZyme k141_189387 k141_189387_3 1564 2634 - GT2
CAZyme k141_189387 k141_189387_4 2637 3689 - GT2
CAZyme k141_189387 k141_189387_5 3679 4728 - GT4
CAZyme k141_189387 k141_189387_6 4762 5661 - GT2
pfam k141_189387 k141_189387_7 5664 6752 - EpsG
CAZyme k141_189387 k141_189387_8 6765 7454 - GT32
CAZyme k141_189387 k141_189387_9 7451 8656 - GT4
Gene ID: k141_189387_2
Type: TC
Location: 953 - 1561 (-)
Gene ID: k141_189387_3
Type: CAZyme
Location: 1564 - 2634 (-)
Gene ID: k141_189387_4
Type: CAZyme
Location: 2637 - 3689 (-)
Gene ID: k141_189387_5
Type: CAZyme
Location: 3679 - 4728 (-)
Gene ID: k141_189387_6
Type: CAZyme
Location: 4762 - 5661 (-)
Gene ID: k141_189387_7
Type: pfam
Location: 5664 - 6752 (-)
Gene ID: k141_189387_8
Type: CAZyme
Location: 6765 - 7454 (-)
Gene ID: k141_189387_9
Type: CAZyme
Location: 7451 - 8656 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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