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Cluster: CGMR000096_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_92622 k141_92622_1 2 2473 + GH31_15
pfam k141_92622 k141_92622_2 2476 3810 + SusF_SusE
pfam k141_92622 k141_92622_3 4025 5692 + DUF6377
TC k141_92622 k141_92622_4 5955 8945 + 1.B.14.6.1
TC k141_92622 k141_92622_5 8967 10703 + 8.A.46.1.1
pfam k141_92622 k141_92622_6 10729 12648 + SusF_SusE | SusF_SusE | SusF_SusE | SusF_SusE | SusF_SusE
CAZyme k141_92622 k141_92622_7 12661 14076 + GH27
CAZyme k141_92622 k141_92622_8 14087 15400 + GH97
Gene ID: k141_92622_1
Type: CAZyme
Location: 2 - 2473 (+)
Gene ID: k141_92622_2
Type: pfam
Location: 2476 - 3810 (+)
Gene ID: k141_92622_3
Type: pfam
Location: 4025 - 5692 (+)
Gene ID: k141_92622_4
Type: TC
Location: 5955 - 8945 (+)
Gene ID: k141_92622_5
Type: TC
Location: 8967 - 10703 (+)
Gene ID: k141_92622_6
Type: pfam
Location: 10729 - 12648 (+)
Gene ID: k141_92622_7
Type: CAZyme
Location: 12661 - 14076 (+)
Gene ID: k141_92622_8
Type: CAZyme
Location: 14087 - 15400 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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