Cluster: C91.bin_7_CGC8
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate: pectin
- Genome ID: C91.bin_7
- CGC Family ID: CGCFAM_00298
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C91_contig_2103 | C91_contig_2103_160 | 202122 | 203771 | + | CE12 | CE12 |
| CAZyme | C91_contig_2103 | C91_contig_2103_161 | 203960 | 206482 | + | CE20 | GH105 |
| CAZyme | C91_contig_2103 | C91_contig_2103_162 | 206490 | 209279 | + | GH106 |
| CAZyme | C91_contig_2103 | C91_contig_2103_163 | 209276 | 211111 | + | PL11 |
| CAZyme | C91_contig_2103 | C91_contig_2103_164 | 211169 | 212689 | + | GH28 |
| pfam | C91_contig_2103 | C91_contig_2103_165 | 212821 | 214287 | + | FGGY_N | FGGY_C |
| pfam | C91_contig_2103 | C91_contig_2103_166 | 214320 | 215573 | + | RhaA |
| TC | C91_contig_2103 | C91_contig_2103_167 | 215664 | 216695 | + | 2.A.7.6.1 |
| pfam | C91_contig_2103 | C91_contig_2103_168 | 216731 | 217540 | + | Aldolase_II |
| pfam | C91_contig_2103 | C91_contig_2103_169 | 217556 | 218710 | + | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| CAZyme | C91_contig_2103 | C91_contig_2103_170 | 218729 | 220051 | + | GH105 |
| TF | C91_contig_2103 | C91_contig_2103_171 | 220197 | 221123 | + | HTH_AraC |
| TC | C91_contig_2103 | C91_contig_2103_172 | 221398 | 224589 | + | 1.B.14.6.1 |
Gene ID: C91_contig_2103_160
Type: CAZyme
Location: 202122 - 203771 (+)
Type: CAZyme
Location: 202122 - 203771 (+)
Gene ID: C91_contig_2103_161
Type: CAZyme
Location: 203960 - 206482 (+)
Type: CAZyme
Location: 203960 - 206482 (+)
Gene ID: C91_contig_2103_162
Type: CAZyme
Location: 206490 - 209279 (+)
Type: CAZyme
Location: 206490 - 209279 (+)
Gene ID: C91_contig_2103_163
Type: CAZyme
Location: 209276 - 211111 (+)
Type: CAZyme
Location: 209276 - 211111 (+)
Gene ID: C91_contig_2103_164
Type: CAZyme
Location: 211169 - 212689 (+)
Type: CAZyme
Location: 211169 - 212689 (+)
Gene ID: C91_contig_2103_165
Type: pfam
Location: 212821 - 214287 (+)
Type: pfam
Location: 212821 - 214287 (+)
Gene ID: C91_contig_2103_166
Type: pfam
Location: 214320 - 215573 (+)
Type: pfam
Location: 214320 - 215573 (+)
Gene ID: C91_contig_2103_167
Type: TC
Location: 215664 - 216695 (+)
Type: TC
Location: 215664 - 216695 (+)
Gene ID: C91_contig_2103_168
Type: pfam
Location: 216731 - 217540 (+)
Type: pfam
Location: 216731 - 217540 (+)
Gene ID: C91_contig_2103_169
Type: pfam
Location: 217556 - 218710 (+)
Type: pfam
Location: 217556 - 218710 (+)
Gene ID: C91_contig_2103_170
Type: CAZyme
Location: 218729 - 220051 (+)
Type: CAZyme
Location: 218729 - 220051 (+)
Gene ID: C91_contig_2103_171
Type: TF
Location: 220197 - 221123 (+)
Type: TF
Location: 220197 - 221123 (+)
Gene ID: C91_contig_2103_172
Type: TC
Location: 221398 - 224589 (+)
Type: TC
Location: 221398 - 224589 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides clarus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.