Cluster: C91.bin_7_CGC54
🧬 Cluster Details
- Gene Count: 25
- CAZyme Count: 9
- Substrate:
- Genome ID: C91.bin_7
- CGC Family ID: CGCFAM_02731
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C91_contig_1669 | C91_contig_1669_227 | 295634 | 296458 | + | 2.A.64.2.1 |
| pfam | C91_contig_1669 | C91_contig_1669_228 | 296455 | 299877 | + | AAA_11 | AAA_11 | AAA_12 | AAA_19 | AAA_30 |
| TC | C91_contig_1669 | C91_contig_1669_229 | 300175 | 301617 | - | 2.A.1.14.25 |
| pfam | C91_contig_1669 | C91_contig_1669_230 | 301760 | 302716 | - | KduI |
| TC | C91_contig_1669 | C91_contig_1669_231 | 302764 | 304137 | - | 4.A.5.1.2 |
| NULL(UNKNOWN) | C91_contig_1669 | C91_contig_1669_232 | 304261 | 304401 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C91_contig_1669 | C91_contig_1669_233 | 304429 | 305652 | + | GH105 |
| CAZyme | C91_contig_1669 | C91_contig_1669_234 | 305652 | 306620 | + | CE8 |
| STP | C91_contig_1669 | C91_contig_1669_235 | 306628 | 306975 | - | AraC_binding |
| CAZyme | C91_contig_1669 | C91_contig_1669_236 | 307034 | 308800 | + | CE12 | CE8 |
| CAZyme | C91_contig_1669 | C91_contig_1669_237 | 308820 | 310142 | + | CE7 |
| CAZyme | C91_contig_1669 | C91_contig_1669_238 | 310189 | 311352 | - | CE19 |
| TF | C91_contig_1669 | C91_contig_1669_239 | 311431 | 315909 | + | HTH_AraC |
| pfam | C91_contig_1669 | C91_contig_1669_240 | 316219 | 317964 | - | SusD_RagB | SusD-like_3 |
| TC | C91_contig_1669 | C91_contig_1669_241 | 318018 | 321242 | - | 1.B.14.6.1 |
| pfam | C91_contig_1669 | C91_contig_1669_242 | 321653 | 322291 | + | Bac_DNA_binding | HU-HIG |
| NULL(UNKNOWN) | C91_contig_1669 | C91_contig_1669_243 | 322513 | 324300 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C91_contig_1669 | C91_contig_1669_244 | 324317 | 326386 | - | 8.A.46.1.3 |
| TC | C91_contig_1669 | C91_contig_1669_245 | 326407 | 329721 | - | 1.B.14.6.1 |
| CAZyme | C91_contig_1669 | C91_contig_1669_246 | 330101 | 332491 | + | PL1_2 |
| CAZyme | C91_contig_1669 | C91_contig_1669_247 | 332621 | 335107 | - | GH95 |
| pfam | C91_contig_1669 | C91_contig_1669_248 | 335115 | 335804 | - | Hydrolase | Hydrolase_like | HAD_2 |
| CAZyme | C91_contig_1669 | C91_contig_1669_249 | 335820 | 337496 | - | CBM91 | GH43_10 |
| pfam | C91_contig_1669 | C91_contig_1669_250 | 337520 | 338749 | - | DUF4861 |
| CAZyme | C91_contig_1669 | C91_contig_1669_251 | 338858 | 340459 | - | GH28 |
Gene ID: C91_contig_1669_227
Type: TC
Location: 295634 - 296458 (+)
Type: TC
Location: 295634 - 296458 (+)
Gene ID: C91_contig_1669_228
Type: pfam
Location: 296455 - 299877 (+)
Type: pfam
Location: 296455 - 299877 (+)
Gene ID: C91_contig_1669_229
Type: TC
Location: 300175 - 301617 (-)
Type: TC
Location: 300175 - 301617 (-)
Gene ID: C91_contig_1669_230
Type: pfam
Location: 301760 - 302716 (-)
Type: pfam
Location: 301760 - 302716 (-)
Gene ID: C91_contig_1669_231
Type: TC
Location: 302764 - 304137 (-)
Type: TC
Location: 302764 - 304137 (-)
Gene ID: C91_contig_1669_232
Type:
Location: 304261 - 304401 (+)
Type:
Location: 304261 - 304401 (+)
Gene ID: C91_contig_1669_233
Type: CAZyme
Location: 304429 - 305652 (+)
Type: CAZyme
Location: 304429 - 305652 (+)
Gene ID: C91_contig_1669_234
Type: CAZyme
Location: 305652 - 306620 (+)
Type: CAZyme
Location: 305652 - 306620 (+)
Gene ID: C91_contig_1669_235
Type: STP
Location: 306628 - 306975 (-)
Type: STP
Location: 306628 - 306975 (-)
Gene ID: C91_contig_1669_236
Type: CAZyme
Location: 307034 - 308800 (+)
Type: CAZyme
Location: 307034 - 308800 (+)
Gene ID: C91_contig_1669_237
Type: CAZyme
Location: 308820 - 310142 (+)
Type: CAZyme
Location: 308820 - 310142 (+)
Gene ID: C91_contig_1669_238
Type: CAZyme
Location: 310189 - 311352 (-)
Type: CAZyme
Location: 310189 - 311352 (-)
Gene ID: C91_contig_1669_239
Type: TF
Location: 311431 - 315909 (+)
Type: TF
Location: 311431 - 315909 (+)
Gene ID: C91_contig_1669_240
Type: pfam
Location: 316219 - 317964 (-)
Type: pfam
Location: 316219 - 317964 (-)
Gene ID: C91_contig_1669_241
Type: TC
Location: 318018 - 321242 (-)
Type: TC
Location: 318018 - 321242 (-)
Gene ID: C91_contig_1669_242
Type: pfam
Location: 321653 - 322291 (+)
Type: pfam
Location: 321653 - 322291 (+)
Gene ID: C91_contig_1669_243
Type:
Location: 322513 - 324300 (-)
Type:
Location: 322513 - 324300 (-)
Gene ID: C91_contig_1669_244
Type: TC
Location: 324317 - 326386 (-)
Type: TC
Location: 324317 - 326386 (-)
Gene ID: C91_contig_1669_245
Type: TC
Location: 326407 - 329721 (-)
Type: TC
Location: 326407 - 329721 (-)
Gene ID: C91_contig_1669_246
Type: CAZyme
Location: 330101 - 332491 (+)
Type: CAZyme
Location: 330101 - 332491 (+)
Gene ID: C91_contig_1669_247
Type: CAZyme
Location: 332621 - 335107 (-)
Type: CAZyme
Location: 332621 - 335107 (-)
Gene ID: C91_contig_1669_248
Type: pfam
Location: 335115 - 335804 (-)
Type: pfam
Location: 335115 - 335804 (-)
Gene ID: C91_contig_1669_249
Type: CAZyme
Location: 335820 - 337496 (-)
Type: CAZyme
Location: 335820 - 337496 (-)
Gene ID: C91_contig_1669_250
Type: pfam
Location: 337520 - 338749 (-)
Type: pfam
Location: 337520 - 338749 (-)
Gene ID: C91_contig_1669_251
Type: CAZyme
Location: 338858 - 340459 (-)
Type: CAZyme
Location: 338858 - 340459 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides clarus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.