Cluster: C91.bin_7_CGC23
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 2
- Substrate:
- Genome ID: C91.bin_7
- CGC Family ID: CGCFAM_08049
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C91_contig_3406 | C91_contig_3406_270 | 351069 | 351824 | - | 3.D.10.1.5 |
| TC | C91_contig_3406 | C91_contig_3406_271 | 351858 | 353804 | - | 3.D.10.1.5 |
| TC | C91_contig_3406 | C91_contig_3406_272 | 353840 | 354544 | - | 3.D.10.1.5 |
| TF | C91_contig_3406 | C91_contig_3406_273 | 354708 | 355541 | - | 0035607 |
| pfam | C91_contig_3406 | C91_contig_3406_274 | 355724 | 356326 | + | PAP2 | PAP2_3 |
| TC | C91_contig_3406 | C91_contig_3406_275 | 356335 | 357948 | - | 9.B.174.1.1 |
| pfam | C91_contig_3406 | C91_contig_3406_276 | 357967 | 358440 | - | CTP_transf_like |
| STP | C91_contig_3406 | C91_contig_3406_277 | 358437 | 360344 | - | HATPase_c |
| TC | C91_contig_3406 | C91_contig_3406_278 | 360758 | 364000 | + | 1.B.14.6.1 |
| pfam | C91_contig_3406 | C91_contig_3406_279 | 364021 | 366018 | + | SusD_RagB | SusD-like_3 |
| pfam | C91_contig_3406 | C91_contig_3406_280 | 366049 | 367956 | + | fn3 | DUF5123 |
| CAZyme | C91_contig_3406 | C91_contig_3406_281 | 367986 | 369593 | + | PL1_2 |
| pfam | C91_contig_3406 | C91_contig_3406_282 | 369653 | 371509 | + | Mfa_like_1 |
| CAZyme | C91_contig_3406 | C91_contig_3406_283 | 371535 | 373985 | + | CE8 |
| TF | C91_contig_3406 | C91_contig_3406_284 | 374126 | 378475 | - | HTH_AraC |
| NULL(UNKNOWN) | C91_contig_3406 | C91_contig_3406_285 | 378594 | 379730 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C91_contig_3406 | C91_contig_3406_286 | 379788 | 380879 | - | 2.A.19.5.2 |
| TC | C91_contig_3406 | C91_contig_3406_287 | 380965 | 382770 | + | 1.A.23.1.4 |
| pfam | C91_contig_3406 | C91_contig_3406_288 | 382944 | 383876 | - | Metallophos |
| TC | C91_contig_3406 | C91_contig_3406_289 | 383919 | 386687 | - | 1.B.14.12.1 |
Gene ID: C91_contig_3406_270
Type: TC
Location: 351069 - 351824 (-)
Type: TC
Location: 351069 - 351824 (-)
Gene ID: C91_contig_3406_271
Type: TC
Location: 351858 - 353804 (-)
Type: TC
Location: 351858 - 353804 (-)
Gene ID: C91_contig_3406_272
Type: TC
Location: 353840 - 354544 (-)
Type: TC
Location: 353840 - 354544 (-)
Gene ID: C91_contig_3406_273
Type: TF
Location: 354708 - 355541 (-)
Type: TF
Location: 354708 - 355541 (-)
Gene ID: C91_contig_3406_274
Type: pfam
Location: 355724 - 356326 (+)
Type: pfam
Location: 355724 - 356326 (+)
Gene ID: C91_contig_3406_275
Type: TC
Location: 356335 - 357948 (-)
Type: TC
Location: 356335 - 357948 (-)
Gene ID: C91_contig_3406_276
Type: pfam
Location: 357967 - 358440 (-)
Type: pfam
Location: 357967 - 358440 (-)
Gene ID: C91_contig_3406_277
Type: STP
Location: 358437 - 360344 (-)
Type: STP
Location: 358437 - 360344 (-)
Gene ID: C91_contig_3406_278
Type: TC
Location: 360758 - 364000 (+)
Type: TC
Location: 360758 - 364000 (+)
Gene ID: C91_contig_3406_279
Type: pfam
Location: 364021 - 366018 (+)
Type: pfam
Location: 364021 - 366018 (+)
Gene ID: C91_contig_3406_280
Type: pfam
Location: 366049 - 367956 (+)
Type: pfam
Location: 366049 - 367956 (+)
Gene ID: C91_contig_3406_281
Type: CAZyme
Location: 367986 - 369593 (+)
Type: CAZyme
Location: 367986 - 369593 (+)
Gene ID: C91_contig_3406_282
Type: pfam
Location: 369653 - 371509 (+)
Type: pfam
Location: 369653 - 371509 (+)
Gene ID: C91_contig_3406_283
Type: CAZyme
Location: 371535 - 373985 (+)
Type: CAZyme
Location: 371535 - 373985 (+)
Gene ID: C91_contig_3406_284
Type: TF
Location: 374126 - 378475 (-)
Type: TF
Location: 374126 - 378475 (-)
Gene ID: C91_contig_3406_285
Type:
Location: 378594 - 379730 (-)
Type:
Location: 378594 - 379730 (-)
Gene ID: C91_contig_3406_286
Type: TC
Location: 379788 - 380879 (-)
Type: TC
Location: 379788 - 380879 (-)
Gene ID: C91_contig_3406_287
Type: TC
Location: 380965 - 382770 (+)
Type: TC
Location: 380965 - 382770 (+)
Gene ID: C91_contig_3406_288
Type: pfam
Location: 382944 - 383876 (-)
Type: pfam
Location: 382944 - 383876 (-)
Gene ID: C91_contig_3406_289
Type: TC
Location: 383919 - 386687 (-)
Type: TC
Location: 383919 - 386687 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides clarus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.