Cluster: C91.bin_7_CGC15
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 8
- Substrate: beta-mannan/xylan/beta-glucan
- Genome ID: C91.bin_7
- CGC Family ID: CGCFAM_00044
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C91_contig_2103 | C91_contig_2103_618 | 772954 | 774813 | + | 2.A.47.4.8 |
| CAZyme | C91_contig_2103 | C91_contig_2103_619 | 775046 | 777079 | - | GH67 |
| CAZyme | C91_contig_2103 | C91_contig_2103_620 | 777093 | 778064 | - | GH43_1 |
| CAZyme | C91_contig_2103 | C91_contig_2103_621 | 778121 | 780883 | - | CBM91 | GH10 | GH43_12 |
| TC | C91_contig_2103 | C91_contig_2103_622 | 780905 | 782317 | - | 2.A.2.3.2 |
| CAZyme | C91_contig_2103 | C91_contig_2103_623 | 782333 | 783985 | - | CE20 | CE20 |
| CAZyme | C91_contig_2103 | C91_contig_2103_624 | 784022 | 785758 | - | GH35 |
| CAZyme | C91_contig_2103 | C91_contig_2103_625 | 786031 | 788322 | - | GH10 |
| pfam | C91_contig_2103 | C91_contig_2103_626 | 788351 | 789751 | - | SGBP_B_XBD |
| pfam | C91_contig_2103 | C91_contig_2103_627 | 789767 | 791500 | - | SusD_RagB | SusD-like_3 |
| TC | C91_contig_2103 | C91_contig_2103_628 | 791522 | 794665 | - | 1.B.14.6.1 |
| TF | C91_contig_2103 | C91_contig_2103_629 | 794991 | 799079 | + | HTH_AraC |
| CAZyme | C91_contig_2103 | C91_contig_2103_630 | 799173 | 801926 | + | PL40 |
| CAZyme | C91_contig_2103 | C91_contig_2103_631 | 801979 | 803325 | + | GH28 |
| NULL(UNKNOWN) | C91_contig_2103 | C91_contig_2103_632 | 803360 | 804577 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C91_contig_2103 | C91_contig_2103_633 | 804600 | 805244 | - | 3.A.1.12.5 |
Gene ID: C91_contig_2103_618
Type: TC
Location: 772954 - 774813 (+)
Type: TC
Location: 772954 - 774813 (+)
Gene ID: C91_contig_2103_619
Type: CAZyme
Location: 775046 - 777079 (-)
Type: CAZyme
Location: 775046 - 777079 (-)
Gene ID: C91_contig_2103_620
Type: CAZyme
Location: 777093 - 778064 (-)
Type: CAZyme
Location: 777093 - 778064 (-)
Gene ID: C91_contig_2103_621
Type: CAZyme
Location: 778121 - 780883 (-)
Type: CAZyme
Location: 778121 - 780883 (-)
Gene ID: C91_contig_2103_622
Type: TC
Location: 780905 - 782317 (-)
Type: TC
Location: 780905 - 782317 (-)
Gene ID: C91_contig_2103_623
Type: CAZyme
Location: 782333 - 783985 (-)
Type: CAZyme
Location: 782333 - 783985 (-)
Gene ID: C91_contig_2103_624
Type: CAZyme
Location: 784022 - 785758 (-)
Type: CAZyme
Location: 784022 - 785758 (-)
Gene ID: C91_contig_2103_625
Type: CAZyme
Location: 786031 - 788322 (-)
Type: CAZyme
Location: 786031 - 788322 (-)
Gene ID: C91_contig_2103_626
Type: pfam
Location: 788351 - 789751 (-)
Type: pfam
Location: 788351 - 789751 (-)
Gene ID: C91_contig_2103_627
Type: pfam
Location: 789767 - 791500 (-)
Type: pfam
Location: 789767 - 791500 (-)
Gene ID: C91_contig_2103_628
Type: TC
Location: 791522 - 794665 (-)
Type: TC
Location: 791522 - 794665 (-)
Gene ID: C91_contig_2103_629
Type: TF
Location: 794991 - 799079 (+)
Type: TF
Location: 794991 - 799079 (+)
Gene ID: C91_contig_2103_630
Type: CAZyme
Location: 799173 - 801926 (+)
Type: CAZyme
Location: 799173 - 801926 (+)
Gene ID: C91_contig_2103_631
Type: CAZyme
Location: 801979 - 803325 (+)
Type: CAZyme
Location: 801979 - 803325 (+)
Gene ID: C91_contig_2103_632
Type:
Location: 803360 - 804577 (-)
Type:
Location: 803360 - 804577 (-)
Gene ID: C91_contig_2103_633
Type: TC
Location: 804600 - 805244 (-)
Type: TC
Location: 804600 - 805244 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides clarus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.