Cluster: C77.CMAG_2_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: C77.CMAG_2
- CGC Family ID: CGCFAM_00979
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C77_contig_975 | C77_contig_975_990 | 1006949 | 1009288 | + | 3.A.1.122.13 |
| peptidase | C77_contig_975 | C77_contig_975_991 | 1009591 | 1010997 | - | M20.UPA |
| pfam | C77_contig_975 | C77_contig_975_992 | 1011085 | 1011807 | - | PseudoU_synth_2 | S4 |
| TC | C77_contig_975 | C77_contig_975_993 | 1011860 | 1013506 | - | 2.A.66.2.14 |
| pfam | C77_contig_975 | C77_contig_975_994 | 1013603 | 1016017 | - | tRNA-synt_1 | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | tRNA-synt_1_2 |
| CAZyme | C77_contig_975 | C77_contig_975_995 | 1016321 | 1019086 | - | GH73 |
Gene ID: C77_contig_975_990
Type: TC
Location: 1006949 - 1009288 (+)
Type: TC
Location: 1006949 - 1009288 (+)
Gene ID: C77_contig_975_991
Type: peptidase
Location: 1009591 - 1010997 (-)
Type: peptidase
Location: 1009591 - 1010997 (-)
Gene ID: C77_contig_975_992
Type: pfam
Location: 1011085 - 1011807 (-)
Type: pfam
Location: 1011085 - 1011807 (-)
Gene ID: C77_contig_975_993
Type: TC
Location: 1011860 - 1013506 (-)
Type: TC
Location: 1011860 - 1013506 (-)
Gene ID: C77_contig_975_994
Type: pfam
Location: 1013603 - 1016017 (-)
Type: pfam
Location: 1013603 - 1016017 (-)
Gene ID: C77_contig_975_995
Type: CAZyme
Location: 1016321 - 1019086 (-)
Type: CAZyme
Location: 1016321 - 1019086 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Vagococcaceae
Genus
Vagococcus
Species
Vagococcus sp003462485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.