Cluster: C77.CMAG_2_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C77.CMAG_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C77_contig_975 | C77_contig_975_1873 | 1966492 | 1968360 | + | 4.A.1.2.2 |
| CAZyme | C77_contig_975 | C77_contig_975_1874 | 1968372 | 1969802 | + | GH1 |
| pfam | C77_contig_975 | C77_contig_975_1875 | 1969921 | 1970211 | + | MtN3_slv |
| TC | C77_contig_975 | C77_contig_975_1876 | 1970331 | 1970975 | + | 1.A.62.2.1 |
| TC | C77_contig_975 | C77_contig_975_1877 | 1971116 | 1972657 | + | 3.A.1.120.6 |
Gene ID: C77_contig_975_1873
Type: TC
Location: 1966492 - 1968360 (+)
Type: TC
Location: 1966492 - 1968360 (+)
Gene ID: C77_contig_975_1874
Type: CAZyme
Location: 1968372 - 1969802 (+)
Type: CAZyme
Location: 1968372 - 1969802 (+)
Gene ID: C77_contig_975_1875
Type: pfam
Location: 1969921 - 1970211 (+)
Type: pfam
Location: 1969921 - 1970211 (+)
Gene ID: C77_contig_975_1876
Type: TC
Location: 1970331 - 1970975 (+)
Type: TC
Location: 1970331 - 1970975 (+)
Gene ID: C77_contig_975_1877
Type: TC
Location: 1971116 - 1972657 (+)
Type: TC
Location: 1971116 - 1972657 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Vagococcaceae
Genus
Vagococcus
Species
Vagococcus sp003462485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.