Cluster: C77.CMAG_2_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C77.CMAG_2
- CGC Family ID: CGCFAM_03494
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C77_contig_975 | C77_contig_975_1514 | 1579068 | 1580579 | + | 4.C.1.1.6 |
| TC | C77_contig_975 | C77_contig_975_1515 | 1580579 | 1581802 | + | 2.A.50.2.1 |
| pfam | C77_contig_975 | C77_contig_975_1516 | 1581816 | 1582052 | + | PP-binding |
| pfam | C77_contig_975 | C77_contig_975_1517 | 1582049 | 1583308 | + | DltD |
| CAZyme | C77_contig_975 | C77_contig_975_1518 | 1583908 | 1584519 | + | GH23 |
Gene ID: C77_contig_975_1514
Type: TC
Location: 1579068 - 1580579 (+)
Type: TC
Location: 1579068 - 1580579 (+)
Gene ID: C77_contig_975_1515
Type: TC
Location: 1580579 - 1581802 (+)
Type: TC
Location: 1580579 - 1581802 (+)
Gene ID: C77_contig_975_1516
Type: pfam
Location: 1581816 - 1582052 (+)
Type: pfam
Location: 1581816 - 1582052 (+)
Gene ID: C77_contig_975_1517
Type: pfam
Location: 1582049 - 1583308 (+)
Type: pfam
Location: 1582049 - 1583308 (+)
Gene ID: C77_contig_975_1518
Type: CAZyme
Location: 1583908 - 1584519 (+)
Type: CAZyme
Location: 1583908 - 1584519 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Vagococcaceae
Genus
Vagococcus
Species
Vagococcus sp003462485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.