Cluster: C77.CMAG_2_CGC12
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: C77.CMAG_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C77_contig_975 | C77_contig_975_1294 | 1328119 | 1329849 | + | 3.A.1.135.7 |
| TC | C77_contig_975 | C77_contig_975_1295 | 1329846 | 1331609 | + | 3.A.1.135.7 |
| pfam | C77_contig_975 | C77_contig_975_1296 | 1331768 | 1332835 | + | GFO_IDH_MocA | GFO_IDH_MocA_C3 |
| TC | C77_contig_975 | C77_contig_975_1297 | 1332840 | 1334135 | + | 1.I.1.1.3 |
| TC | C77_contig_975 | C77_contig_975_1298 | 1334157 | 1334483 | + | 4.A.3.2.9 |
| pfam | C77_contig_975 | C77_contig_975_1299 | 1334927 | 1335706 | + | PRD | PRD |
| TC | C77_contig_975 | C77_contig_975_1300 | 1335711 | 1337591 | + | 4.A.1.2.11 |
| CAZyme | C77_contig_975 | C77_contig_975_1301 | 1337604 | 1339046 | + | GH1 |
| STP | C77_contig_975 | C77_contig_975_1302 | 1339269 | 1339715 | + | FeoA | FeoA |
| TC | C77_contig_975 | C77_contig_975_1303 | 1339718 | 1341862 | + | 9.A.8.1.6 |
| NULL(UNKNOWN) | C77_contig_975 | C77_contig_975_1304 | 1341873 | 1341998 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | C77_contig_975 | C77_contig_975_1305 | 1342479 | 1342649 | + | AXE1 |
| CAZyme | C77_contig_975 | C77_contig_975_1306 | 1342812 | 1343447 | + | CE7 |
Gene ID: C77_contig_975_1294
Type: TC
Location: 1328119 - 1329849 (+)
Type: TC
Location: 1328119 - 1329849 (+)
Gene ID: C77_contig_975_1295
Type: TC
Location: 1329846 - 1331609 (+)
Type: TC
Location: 1329846 - 1331609 (+)
Gene ID: C77_contig_975_1296
Type: pfam
Location: 1331768 - 1332835 (+)
Type: pfam
Location: 1331768 - 1332835 (+)
Gene ID: C77_contig_975_1297
Type: TC
Location: 1332840 - 1334135 (+)
Type: TC
Location: 1332840 - 1334135 (+)
Gene ID: C77_contig_975_1298
Type: TC
Location: 1334157 - 1334483 (+)
Type: TC
Location: 1334157 - 1334483 (+)
Gene ID: C77_contig_975_1299
Type: pfam
Location: 1334927 - 1335706 (+)
Type: pfam
Location: 1334927 - 1335706 (+)
Gene ID: C77_contig_975_1300
Type: TC
Location: 1335711 - 1337591 (+)
Type: TC
Location: 1335711 - 1337591 (+)
Gene ID: C77_contig_975_1301
Type: CAZyme
Location: 1337604 - 1339046 (+)
Type: CAZyme
Location: 1337604 - 1339046 (+)
Gene ID: C77_contig_975_1302
Type: STP
Location: 1339269 - 1339715 (+)
Type: STP
Location: 1339269 - 1339715 (+)
Gene ID: C77_contig_975_1303
Type: TC
Location: 1339718 - 1341862 (+)
Type: TC
Location: 1339718 - 1341862 (+)
Gene ID: C77_contig_975_1304
Type:
Location: 1341873 - 1341998 (+)
Type:
Location: 1341873 - 1341998 (+)
Gene ID: C77_contig_975_1305
Type: pfam
Location: 1342479 - 1342649 (+)
Type: pfam
Location: 1342479 - 1342649 (+)
Gene ID: C77_contig_975_1306
Type: CAZyme
Location: 1342812 - 1343447 (+)
Type: CAZyme
Location: 1342812 - 1343447 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Vagococcaceae
Genus
Vagococcus
Species
Vagococcus sp003462485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.