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Cluster: C73.bin_5_CGC68

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C73_contig_1544 C73_contig_1544_3256 3988471 3990255 - 2.A.49.6.1
TC C73_contig_1544 C73_contig_1544_3257 3990257 3991657 - 9.B.18.1.3
pfam C73_contig_1544 C73_contig_1544_3258 3991660 3992187 - Sua5_yciO_yrdC
pfam C73_contig_1544 C73_contig_1544_3259 3992444 3994168 + DHH | DHHA1 | RecJ_OB
TC C73_contig_1544 C73_contig_1544_3260 3994289 3996094 + 2.A.16.2.2
pfam C73_contig_1544 C73_contig_1544_3261 3996192 3997103 - ThuA
sulfatase C73_contig_1544 C73_contig_1544_3262 3997144 3998070 - S1_7
TC C73_contig_1544 C73_contig_1544_3263 3998245 3999975 - 2.A.81.1.2
pfam C73_contig_1544 C73_contig_1544_3264 4000030 4000839 + Pro_isomerase | Pro_isomerase
NULL(UNKNOWN) C73_contig_1544 C73_contig_1544_3265 4000852 4001241 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C73_contig_1544 C73_contig_1544_3266 4001235 4002356 - GH43_33
Gene ID: C73_contig_1544_3256
Type: TC
Location: 3988471 - 3990255 (-)
Gene ID: C73_contig_1544_3257
Type: TC
Location: 3990257 - 3991657 (-)
Gene ID: C73_contig_1544_3258
Type: pfam
Location: 3991660 - 3992187 (-)
Gene ID: C73_contig_1544_3259
Type: pfam
Location: 3992444 - 3994168 (+)
Gene ID: C73_contig_1544_3260
Type: TC
Location: 3994289 - 3996094 (+)
Gene ID: C73_contig_1544_3261
Type: pfam
Location: 3996192 - 3997103 (-)
Gene ID: C73_contig_1544_3262
Type: sulfatase
Location: 3997144 - 3998070 (-)
Gene ID: C73_contig_1544_3263
Type: TC
Location: 3998245 - 3999975 (-)
Gene ID: C73_contig_1544_3264
Type: pfam
Location: 4000030 - 4000839 (+)
Gene ID: C73_contig_1544_3265
Type:
Location: 4000852 - 4001241 (+)
Gene ID: C73_contig_1544_3266
Type: CAZyme
Location: 4001235 - 4002356 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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