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Cluster: C73.bin_5_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C73_contig_1544 C73_contig_1544_2325 2877008 2878012 + GH43_34
STP C73_contig_1544 C73_contig_1544_2326 2878223 2878852 + TetR_N
pfam C73_contig_1544 C73_contig_1544_2327 2878890 2880176 + OEP | OEP
TC C73_contig_1544 C73_contig_1544_2328 2880204 2881094 + 3.A.1.105.16
TC C73_contig_1544 C73_contig_1544_2329 2881087 2881992 + 3.A.1.105.15
TC C73_contig_1544 C73_contig_1544_2330 2882261 2882995 + 3.A.1.105.15
TC C73_contig_1544 C73_contig_1544_2331 2882999 2884084 + 3.A.1.105.4
TC C73_contig_1544 C73_contig_1544_2332 2884088 2885179 + 3.A.1.105.4
TC C73_contig_1544 C73_contig_1544_2333 2885243 2886562 + 2.A.8.1.4
Gene ID: C73_contig_1544_2325
Type: CAZyme
Location: 2877008 - 2878012 (+)
Gene ID: C73_contig_1544_2326
Type: STP
Location: 2878223 - 2878852 (+)
Gene ID: C73_contig_1544_2327
Type: pfam
Location: 2878890 - 2880176 (+)
Gene ID: C73_contig_1544_2328
Type: TC
Location: 2880204 - 2881094 (+)
Gene ID: C73_contig_1544_2329
Type: TC
Location: 2881087 - 2881992 (+)
Gene ID: C73_contig_1544_2330
Type: TC
Location: 2882261 - 2882995 (+)
Gene ID: C73_contig_1544_2331
Type: TC
Location: 2882999 - 2884084 (+)
Gene ID: C73_contig_1544_2332
Type: TC
Location: 2884088 - 2885179 (+)
Gene ID: C73_contig_1544_2333
Type: TC
Location: 2885243 - 2886562 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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