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Cluster: C73.bin_5_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C73_contig_1544 C73_contig_1544_1771 2218055 2219200 + GT4
pfam C73_contig_1544 C73_contig_1544_1772 2219221 2220591 + adh_short | NTP_transferase | IspD | KR | NTP_transf_3 | adh_short_C2
pfam C73_contig_1544 C73_contig_1544_1773 2220594 2221502 + LicD
CAZyme C73_contig_1544 C73_contig_1544_1774 2221526 2222713 + GT4
pfam C73_contig_1544 C73_contig_1544_1775 2222748 2223953 + Aminotran_1_2 | DegT_DnrJ_EryC1
TC C73_contig_1544 C73_contig_1544_1776 2223969 2224559 + 9.B.18.1.2
TC C73_contig_1544 C73_contig_1544_1777 2224617 2226530 + 9.B.18.2.1
Gene ID: C73_contig_1544_1771
Type: CAZyme
Location: 2218055 - 2219200 (+)
Gene ID: C73_contig_1544_1772
Type: pfam
Location: 2219221 - 2220591 (+)
Gene ID: C73_contig_1544_1773
Type: pfam
Location: 2220594 - 2221502 (+)
Gene ID: C73_contig_1544_1774
Type: CAZyme
Location: 2221526 - 2222713 (+)
Gene ID: C73_contig_1544_1775
Type: pfam
Location: 2222748 - 2223953 (+)
Gene ID: C73_contig_1544_1776
Type: TC
Location: 2223969 - 2224559 (+)
Gene ID: C73_contig_1544_1777
Type: TC
Location: 2224617 - 2226530 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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