Cluster: C73.bin_5_CGC34
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: C73.bin_5
- CGC Family ID: CGCFAM_01173
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C73_contig_1544 | C73_contig_1544_1207 | 1583883 | 1586234 | - | GH3 |
| CAZyme | C73_contig_1544 | C73_contig_1544_1208 | 1586420 | 1588195 | - | GH123 |
| pfam | C73_contig_1544 | C73_contig_1544_1209 | 1588253 | 1589329 | - | Radical_SAM | SPASM |
| NULL(UNKNOWN) | C73_contig_1544 | C73_contig_1544_1210 | 1589335 | 1590177 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C73_contig_1544 | C73_contig_1544_1211 | 1590334 | 1592181 | + | 3.A.1.135.5 |
| CAZyme | C73_contig_1544 | C73_contig_1544_1212 | 1592264 | 1594693 | + | GH95 |
| pfam | C73_contig_1544 | C73_contig_1544_1213 | 1594777 | 1595991 | - | Porin_O_P |
| pfam | C73_contig_1544 | C73_contig_1544_1214 | 1596032 | 1596706 | - | PhoU | PhoU |
| TC | C73_contig_1544 | C73_contig_1544_1215 | 1596738 | 1597490 | - | 3.A.1.7.1 |
| TC | C73_contig_1544 | C73_contig_1544_1216 | 1597506 | 1598393 | - | 3.A.1.7.2 |
| TC | C73_contig_1544 | C73_contig_1544_1217 | 1598402 | 1599589 | - | 3.A.1.7.5 |
Gene ID: C73_contig_1544_1207
Type: CAZyme
Location: 1583883 - 1586234 (-)
Type: CAZyme
Location: 1583883 - 1586234 (-)
Gene ID: C73_contig_1544_1208
Type: CAZyme
Location: 1586420 - 1588195 (-)
Type: CAZyme
Location: 1586420 - 1588195 (-)
Gene ID: C73_contig_1544_1209
Type: pfam
Location: 1588253 - 1589329 (-)
Type: pfam
Location: 1588253 - 1589329 (-)
Gene ID: C73_contig_1544_1210
Type:
Location: 1589335 - 1590177 (-)
Type:
Location: 1589335 - 1590177 (-)
Gene ID: C73_contig_1544_1211
Type: TC
Location: 1590334 - 1592181 (+)
Type: TC
Location: 1590334 - 1592181 (+)
Gene ID: C73_contig_1544_1212
Type: CAZyme
Location: 1592264 - 1594693 (+)
Type: CAZyme
Location: 1592264 - 1594693 (+)
Gene ID: C73_contig_1544_1213
Type: pfam
Location: 1594777 - 1595991 (-)
Type: pfam
Location: 1594777 - 1595991 (-)
Gene ID: C73_contig_1544_1214
Type: pfam
Location: 1596032 - 1596706 (-)
Type: pfam
Location: 1596032 - 1596706 (-)
Gene ID: C73_contig_1544_1215
Type: TC
Location: 1596738 - 1597490 (-)
Type: TC
Location: 1596738 - 1597490 (-)
Gene ID: C73_contig_1544_1216
Type: TC
Location: 1597506 - 1598393 (-)
Type: TC
Location: 1597506 - 1598393 (-)
Gene ID: C73_contig_1544_1217
Type: TC
Location: 1598402 - 1599589 (-)
Type: TC
Location: 1598402 - 1599589 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides distasonis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.