Cluster: C73.bin_12_CGC53
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 5
- Substrate:
- Genome ID: C73.bin_12
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C73_contig_349 | C73_contig_349_1057 | 1137724 | 1139193 | - | GH77 |
| NULL(UNKNOWN) | C73_contig_349 | C73_contig_349_1058 | 1139190 | 1139306 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C73_contig_349 | C73_contig_349_1059 | 1139335 | 1141644 | - | GT35 |
| TF | C73_contig_349 | C73_contig_349_1060 | 1141724 | 1142716 | - | LacI |
| TF | C73_contig_349 | C73_contig_349_1061 | 1142870 | 1144486 | - | HTH_AraC | HTH_AraC |
| TC | C73_contig_349 | C73_contig_349_1062 | 1144504 | 1146306 | - | 8.A.59.2.1 |
| NULL(UNKNOWN) | C73_contig_349 | C73_contig_349_1063 | 1146392 | 1147999 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | C73_contig_349 | C73_contig_349_1064 | 1148054 | 1149535 | - | M17.UPW |
| CAZyme | C73_contig_349 | C73_contig_349_1065 | 1149559 | 1150923 | - | GH4 |
| STP | C73_contig_349 | C73_contig_349_1066 | 1150920 | 1151870 | - | PfkB |
| TC | C73_contig_349 | C73_contig_349_1067 | 1152067 | 1152987 | - | 3.A.1.1.29 |
| STP | C73_contig_349 | C73_contig_349_1068 | 1153053 | 1154810 | - | SBP_bac_1 |
| TC | C73_contig_349 | C73_contig_349_1069 | 1154847 | 1155731 | - | 3.A.1.1.10 |
| CAZyme | C73_contig_349 | C73_contig_349_1070 | 1155907 | 1158882 | - | GH2 |
| CAZyme | C73_contig_349 | C73_contig_349_1071 | 1159099 | 1160130 | + | GH117 | GH117 |
| pfam | C73_contig_349 | C73_contig_349_1072 | 1160204 | 1161970 | + | DUF6669 |
| NULL(UNKNOWN) | C73_contig_349 | C73_contig_349_1073 | 1162202 | 1162525 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C73_contig_349 | C73_contig_349_1074 | 1162664 | 1164484 | - | 3.A.1.111.2 |
| TC | C73_contig_349 | C73_contig_349_1075 | 1164508 | 1166295 | - | 3.A.1.111.2 |
Gene ID: C73_contig_349_1057
Type: CAZyme
Location: 1137724 - 1139193 (-)
Type: CAZyme
Location: 1137724 - 1139193 (-)
Gene ID: C73_contig_349_1058
Type:
Location: 1139190 - 1139306 (-)
Type:
Location: 1139190 - 1139306 (-)
Gene ID: C73_contig_349_1059
Type: CAZyme
Location: 1139335 - 1141644 (-)
Type: CAZyme
Location: 1139335 - 1141644 (-)
Gene ID: C73_contig_349_1060
Type: TF
Location: 1141724 - 1142716 (-)
Type: TF
Location: 1141724 - 1142716 (-)
Gene ID: C73_contig_349_1061
Type: TF
Location: 1142870 - 1144486 (-)
Type: TF
Location: 1142870 - 1144486 (-)
Gene ID: C73_contig_349_1062
Type: TC
Location: 1144504 - 1146306 (-)
Type: TC
Location: 1144504 - 1146306 (-)
Gene ID: C73_contig_349_1063
Type:
Location: 1146392 - 1147999 (-)
Type:
Location: 1146392 - 1147999 (-)
Gene ID: C73_contig_349_1064
Type: peptidase
Location: 1148054 - 1149535 (-)
Type: peptidase
Location: 1148054 - 1149535 (-)
Gene ID: C73_contig_349_1065
Type: CAZyme
Location: 1149559 - 1150923 (-)
Type: CAZyme
Location: 1149559 - 1150923 (-)
Gene ID: C73_contig_349_1066
Type: STP
Location: 1150920 - 1151870 (-)
Type: STP
Location: 1150920 - 1151870 (-)
Gene ID: C73_contig_349_1067
Type: TC
Location: 1152067 - 1152987 (-)
Type: TC
Location: 1152067 - 1152987 (-)
Gene ID: C73_contig_349_1068
Type: STP
Location: 1153053 - 1154810 (-)
Type: STP
Location: 1153053 - 1154810 (-)
Gene ID: C73_contig_349_1069
Type: TC
Location: 1154847 - 1155731 (-)
Type: TC
Location: 1154847 - 1155731 (-)
Gene ID: C73_contig_349_1070
Type: CAZyme
Location: 1155907 - 1158882 (-)
Type: CAZyme
Location: 1155907 - 1158882 (-)
Gene ID: C73_contig_349_1071
Type: CAZyme
Location: 1159099 - 1160130 (+)
Type: CAZyme
Location: 1159099 - 1160130 (+)
Gene ID: C73_contig_349_1072
Type: pfam
Location: 1160204 - 1161970 (+)
Type: pfam
Location: 1160204 - 1161970 (+)
Gene ID: C73_contig_349_1073
Type:
Location: 1162202 - 1162525 (-)
Type:
Location: 1162202 - 1162525 (-)
Gene ID: C73_contig_349_1074
Type: TC
Location: 1162664 - 1164484 (-)
Type: TC
Location: 1162664 - 1164484 (-)
Gene ID: C73_contig_349_1075
Type: TC
Location: 1164508 - 1166295 (-)
Type: TC
Location: 1164508 - 1166295 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C73_contig_349_1067 | vegan > omnivore | 1.24595 | 0.03297 |