Cluster: C73.bin_12_CGC5
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: C73.bin_12
- CGC Family ID: CGCFAM_04428
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C73_contig_376 | C73_contig_376_113 | 141669 | 143429 | - | 3.A.1.106.15 |
| CAZyme | C73_contig_376 | C73_contig_376_114 | 143445 | 144365 | - | GT2 |
| CAZyme | C73_contig_376 | C73_contig_376_115 | 144777 | 145655 | - | GT17 |
| pfam | C73_contig_376 | C73_contig_376_116 | 145669 | 147213 | - | DUF6056 |
| CAZyme | C73_contig_376 | C73_contig_376_117 | 147231 | 148259 | - | GT11 |
| CAZyme | C73_contig_376 | C73_contig_376_118 | 148345 | 149202 | - | GT11 |
| CAZyme | C73_contig_376 | C73_contig_376_119 | 149230 | 150306 | - | GT2 |
| peptidase | C73_contig_376 | C73_contig_376_120 | 150409 | 152292 | - | C44.001 |
| NULL(UNKNOWN) | C73_contig_376 | C73_contig_376_121 | 152312 | 153385 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C73_contig_376 | C73_contig_376_122 | 153464 | 154951 | - | 2.A.50.2.1 |
| pfam | C73_contig_376 | C73_contig_376_123 | 154971 | 155210 | - | PP-binding |
| CAZyme | C73_contig_376 | C73_contig_376_124 | 155538 | 156638 | - | GT4 |
Gene ID: C73_contig_376_113
Type: TC
Location: 141669 - 143429 (-)
Type: TC
Location: 141669 - 143429 (-)
Gene ID: C73_contig_376_114
Type: CAZyme
Location: 143445 - 144365 (-)
Type: CAZyme
Location: 143445 - 144365 (-)
Gene ID: C73_contig_376_115
Type: CAZyme
Location: 144777 - 145655 (-)
Type: CAZyme
Location: 144777 - 145655 (-)
Gene ID: C73_contig_376_116
Type: pfam
Location: 145669 - 147213 (-)
Type: pfam
Location: 145669 - 147213 (-)
Gene ID: C73_contig_376_117
Type: CAZyme
Location: 147231 - 148259 (-)
Type: CAZyme
Location: 147231 - 148259 (-)
Gene ID: C73_contig_376_118
Type: CAZyme
Location: 148345 - 149202 (-)
Type: CAZyme
Location: 148345 - 149202 (-)
Gene ID: C73_contig_376_119
Type: CAZyme
Location: 149230 - 150306 (-)
Type: CAZyme
Location: 149230 - 150306 (-)
Gene ID: C73_contig_376_120
Type: peptidase
Location: 150409 - 152292 (-)
Type: peptidase
Location: 150409 - 152292 (-)
Gene ID: C73_contig_376_121
Type:
Location: 152312 - 153385 (-)
Type:
Location: 152312 - 153385 (-)
Gene ID: C73_contig_376_122
Type: TC
Location: 153464 - 154951 (-)
Type: TC
Location: 153464 - 154951 (-)
Gene ID: C73_contig_376_123
Type: pfam
Location: 154971 - 155210 (-)
Type: pfam
Location: 154971 - 155210 (-)
Gene ID: C73_contig_376_124
Type: CAZyme
Location: 155538 - 156638 (-)
Type: CAZyme
Location: 155538 - 156638 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C73_contig_376_123 | vegetarian > vegan | 1.02299 | 0.02541 |