Cluster: C73.bin_12_CGC43
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: C73.bin_12
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C73_contig_349 | C73_contig_349_148 | 174854 | 175879 | + | GT2 |
| pfam | C73_contig_349 | C73_contig_349_149 | 175963 | 179199 | + | MGS | ATP-grasp | ATP-grasp | CPSase_L_D2 | CPSase_L_D2 | CPSase_L_D3 | Dala_Dala_lig_C | Dala_Dala_lig_C |
| pfam | C73_contig_349 | C73_contig_349_150 | 179525 | 180274 | - | His_Phos_1 | His_Phos_1 |
| TC | C73_contig_349 | C73_contig_349_151 | 180686 | 182029 | + | 2.A.66.1.32 |
| pfam | C73_contig_349 | C73_contig_349_152 | 182232 | 183575 | + | Peripla_BP_4 | Peripla_BP_7 |
| TC | C73_contig_349 | C73_contig_349_153 | 183666 | 185174 | + | 3.A.1.2.3 |
| TC | C73_contig_349 | C73_contig_349_154 | 185191 | 186843 | + | 3.A.1.2.3 |
| TF | C73_contig_349 | C73_contig_349_155 | 187115 | 188728 | + | HTH_AraC | HTH_AraC |
| TC | C73_contig_349 | C73_contig_349_156 | 188775 | 190547 | + | 8.A.59.2.1 |
| pfam | C73_contig_349 | C73_contig_349_157 | 190528 | 191478 | + | Peripla_BP_4 |
| TC | C73_contig_349 | C73_contig_349_158 | 191471 | 192550 | + | 3.A.1.2.3 |
Gene ID: C73_contig_349_148
Type: CAZyme
Location: 174854 - 175879 (+)
Type: CAZyme
Location: 174854 - 175879 (+)
Gene ID: C73_contig_349_149
Type: pfam
Location: 175963 - 179199 (+)
Type: pfam
Location: 175963 - 179199 (+)
Gene ID: C73_contig_349_150
Type: pfam
Location: 179525 - 180274 (-)
Type: pfam
Location: 179525 - 180274 (-)
Gene ID: C73_contig_349_151
Type: TC
Location: 180686 - 182029 (+)
Type: TC
Location: 180686 - 182029 (+)
Gene ID: C73_contig_349_152
Type: pfam
Location: 182232 - 183575 (+)
Type: pfam
Location: 182232 - 183575 (+)
Gene ID: C73_contig_349_153
Type: TC
Location: 183666 - 185174 (+)
Type: TC
Location: 183666 - 185174 (+)
Gene ID: C73_contig_349_154
Type: TC
Location: 185191 - 186843 (+)
Type: TC
Location: 185191 - 186843 (+)
Gene ID: C73_contig_349_155
Type: TF
Location: 187115 - 188728 (+)
Type: TF
Location: 187115 - 188728 (+)
Gene ID: C73_contig_349_156
Type: TC
Location: 188775 - 190547 (+)
Type: TC
Location: 188775 - 190547 (+)
Gene ID: C73_contig_349_157
Type: pfam
Location: 190528 - 191478 (+)
Type: pfam
Location: 190528 - 191478 (+)
Gene ID: C73_contig_349_158
Type: TC
Location: 191471 - 192550 (+)
Type: TC
Location: 191471 - 192550 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.