Cluster: C73.bin_12_CGC3
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 9
- Substrate:
- Genome ID: C73.bin_12
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C73_contig_376 | C73_contig_376_80 | 100321 | 102069 | - | 3.A.1.106.15 |
| CAZyme | C73_contig_376 | C73_contig_376_81 | 102087 | 102965 | - | GT11 |
| pfam | C73_contig_376 | C73_contig_376_82 | 102977 | 103867 | - | ATPgrasp_TupA |
| NULL(UNKNOWN) | C73_contig_376 | C73_contig_376_83 | 104164 | 105150 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C73_contig_376 | C73_contig_376_84 | 105157 | 106152 | - | GT2 |
| CAZyme | C73_contig_376 | C73_contig_376_85 | 106159 | 107238 | - | GT10 |
| NULL(UNKNOWN) | C73_contig_376 | C73_contig_376_86 | 107251 | 108276 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C73_contig_376 | C73_contig_376_87 | 108281 | 109297 | - | GT2 |
| CAZyme | C73_contig_376 | C73_contig_376_88 | 109307 | 110359 | - | GT2 |
| pfam | C73_contig_376 | C73_contig_376_89 | 110373 | 111467 | - | Glycos_transf_1 | Glyco_trans_1_2 | Glyco_trans_1_4 |
| CAZyme | C73_contig_376 | C73_contig_376_90 | 111522 | 112727 | - | GT4 |
| CAZyme | C73_contig_376 | C73_contig_376_91 | 112724 | 114667 | - | GT26 | GT4 |
| NULL(UNKNOWN) | C73_contig_376 | C73_contig_376_92 | 114660 | 116291 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | C73_contig_376 | C73_contig_376_93 | 116456 | 117559 | - | Aminotran_1_2 |
| CAZyme | C73_contig_376 | C73_contig_376_94 | 117601 | 118347 | - | GT2 |
| CAZyme | C73_contig_376 | C73_contig_376_95 | 118344 | 119291 | - | GT2 |
Gene ID: C73_contig_376_80
Type: TC
Location: 100321 - 102069 (-)
Type: TC
Location: 100321 - 102069 (-)
Gene ID: C73_contig_376_81
Type: CAZyme
Location: 102087 - 102965 (-)
Type: CAZyme
Location: 102087 - 102965 (-)
Gene ID: C73_contig_376_82
Type: pfam
Location: 102977 - 103867 (-)
Type: pfam
Location: 102977 - 103867 (-)
Gene ID: C73_contig_376_83
Type:
Location: 104164 - 105150 (-)
Type:
Location: 104164 - 105150 (-)
Gene ID: C73_contig_376_84
Type: CAZyme
Location: 105157 - 106152 (-)
Type: CAZyme
Location: 105157 - 106152 (-)
Gene ID: C73_contig_376_85
Type: CAZyme
Location: 106159 - 107238 (-)
Type: CAZyme
Location: 106159 - 107238 (-)
Gene ID: C73_contig_376_86
Type:
Location: 107251 - 108276 (-)
Type:
Location: 107251 - 108276 (-)
Gene ID: C73_contig_376_87
Type: CAZyme
Location: 108281 - 109297 (-)
Type: CAZyme
Location: 108281 - 109297 (-)
Gene ID: C73_contig_376_88
Type: CAZyme
Location: 109307 - 110359 (-)
Type: CAZyme
Location: 109307 - 110359 (-)
Gene ID: C73_contig_376_89
Type: pfam
Location: 110373 - 111467 (-)
Type: pfam
Location: 110373 - 111467 (-)
Gene ID: C73_contig_376_90
Type: CAZyme
Location: 111522 - 112727 (-)
Type: CAZyme
Location: 111522 - 112727 (-)
Gene ID: C73_contig_376_91
Type: CAZyme
Location: 112724 - 114667 (-)
Type: CAZyme
Location: 112724 - 114667 (-)
Gene ID: C73_contig_376_92
Type:
Location: 114660 - 116291 (-)
Type:
Location: 114660 - 116291 (-)
Gene ID: C73_contig_376_93
Type: STP
Location: 116456 - 117559 (-)
Type: STP
Location: 116456 - 117559 (-)
Gene ID: C73_contig_376_94
Type: CAZyme
Location: 117601 - 118347 (-)
Type: CAZyme
Location: 117601 - 118347 (-)
Gene ID: C73_contig_376_95
Type: CAZyme
Location: 118344 - 119291 (-)
Type: CAZyme
Location: 118344 - 119291 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C73_contig_376_93 | vegetarian > vegan | 1.11352 | 0.03542 |