Cluster: C73.bin_12_CGC26
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 1
- Substrate:
- Genome ID: C73.bin_12
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C73_contig_376 | C73_contig_376_955 | 1119178 | 1120677 | + | 3.A.1.1.10 |
| TC | C73_contig_376 | C73_contig_376_956 | 1120691 | 1121602 | + | 3.A.1.1.29 |
| STP | C73_contig_376 | C73_contig_376_957 | 1121707 | 1123305 | + | SBP_bac_1 |
| CAZyme | C73_contig_376 | C73_contig_376_958 | 1123665 | 1124933 | + | GH177 |
| pfam | C73_contig_376 | C73_contig_376_959 | 1125166 | 1126041 | - | DegV |
| pfam | C73_contig_376 | C73_contig_376_960 | 1126062 | 1127519 | - | NAPRTase | NAPRTase_N | NAPRTase_C |
| TC | C73_contig_376 | C73_contig_376_961 | 1127889 | 1129151 | - | 2.A.1.24.4 |
| TC | C73_contig_376 | C73_contig_376_962 | 1129303 | 1130604 | - | 2.A.49.9.2 |
| pfam | C73_contig_376 | C73_contig_376_963 | 1130803 | 1131150 | - | HEAT_2 |
| pfam | C73_contig_376 | C73_contig_376_964 | 1131888 | 1135052 | + | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915 |
| TC | C73_contig_376 | C73_contig_376_965 | 1135294 | 1136721 | - | 2.A.66.1.28 |
| TC | C73_contig_376 | C73_contig_376_966 | 1136930 | 1138822 | + | 3.A.1.120.6 |
| peptidase | C73_contig_376 | C73_contig_376_967 | 1138815 | 1139690 | + | M24.UPA |
| pfam | C73_contig_376 | C73_contig_376_968 | 1139839 | 1141005 | + | MFS_1 | MFS_1 |
| TC | C73_contig_376 | C73_contig_376_969 | 1141098 | 1142960 | - | 3.A.1.106.1 |
| TC | C73_contig_376 | C73_contig_376_970 | 1142963 | 1144786 | - | 3.A.1.111.2 |
Gene ID: C73_contig_376_955
Type: TC
Location: 1119178 - 1120677 (+)
Type: TC
Location: 1119178 - 1120677 (+)
Gene ID: C73_contig_376_956
Type: TC
Location: 1120691 - 1121602 (+)
Type: TC
Location: 1120691 - 1121602 (+)
Gene ID: C73_contig_376_957
Type: STP
Location: 1121707 - 1123305 (+)
Type: STP
Location: 1121707 - 1123305 (+)
Gene ID: C73_contig_376_958
Type: CAZyme
Location: 1123665 - 1124933 (+)
Type: CAZyme
Location: 1123665 - 1124933 (+)
Gene ID: C73_contig_376_959
Type: pfam
Location: 1125166 - 1126041 (-)
Type: pfam
Location: 1125166 - 1126041 (-)
Gene ID: C73_contig_376_960
Type: pfam
Location: 1126062 - 1127519 (-)
Type: pfam
Location: 1126062 - 1127519 (-)
Gene ID: C73_contig_376_961
Type: TC
Location: 1127889 - 1129151 (-)
Type: TC
Location: 1127889 - 1129151 (-)
Gene ID: C73_contig_376_962
Type: TC
Location: 1129303 - 1130604 (-)
Type: TC
Location: 1129303 - 1130604 (-)
Gene ID: C73_contig_376_963
Type: pfam
Location: 1130803 - 1131150 (-)
Type: pfam
Location: 1130803 - 1131150 (-)
Gene ID: C73_contig_376_964
Type: pfam
Location: 1131888 - 1135052 (+)
Type: pfam
Location: 1131888 - 1135052 (+)
Gene ID: C73_contig_376_965
Type: TC
Location: 1135294 - 1136721 (-)
Type: TC
Location: 1135294 - 1136721 (-)
Gene ID: C73_contig_376_966
Type: TC
Location: 1136930 - 1138822 (+)
Type: TC
Location: 1136930 - 1138822 (+)
Gene ID: C73_contig_376_967
Type: peptidase
Location: 1138815 - 1139690 (+)
Type: peptidase
Location: 1138815 - 1139690 (+)
Gene ID: C73_contig_376_968
Type: pfam
Location: 1139839 - 1141005 (+)
Type: pfam
Location: 1139839 - 1141005 (+)
Gene ID: C73_contig_376_969
Type: TC
Location: 1141098 - 1142960 (-)
Type: TC
Location: 1141098 - 1142960 (-)
Gene ID: C73_contig_376_970
Type: TC
Location: 1142963 - 1144786 (-)
Type: TC
Location: 1142963 - 1144786 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.