Cluster: C73.bin_12_CGC13
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: C73.bin_12
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C73_contig_376 | C73_contig_376_657 | 772249 | 773997 | - | 8.A.59.2.1 |
| pfam | C73_contig_376 | C73_contig_376_658 | 774317 | 775144 | + | DEDD_Tnp_IS110 |
| pfam | C73_contig_376 | C73_contig_376_659 | 775132 | 775593 | + | Transposase_20 |
| TC | C73_contig_376 | C73_contig_376_660 | 776009 | 777358 | + | 3.A.1.1.16 |
| TC | C73_contig_376 | C73_contig_376_661 | 777455 | 778336 | + | 3.A.1.1.20 |
| TC | C73_contig_376 | C73_contig_376_662 | 778345 | 779160 | + | 3.A.1.1.39 |
| CAZyme | C73_contig_376 | C73_contig_376_663 | 779197 | 780387 | + | GH172 |
| CAZyme | C73_contig_376 | C73_contig_376_664 | 780403 | 781590 | + | GH109 |
| pfam | C73_contig_376 | C73_contig_376_665 | 781922 | 783289 | + | FAD-depend_C |
| pfam | C73_contig_376 | C73_contig_376_666 | 783298 | 783882 | + | Hexapep | Mac | Hexapep_2 |
| TC | C73_contig_376 | C73_contig_376_667 | 784080 | 784868 | - | 1.A.16.2.4 |
Gene ID: C73_contig_376_657
Type: TC
Location: 772249 - 773997 (-)
Type: TC
Location: 772249 - 773997 (-)
Gene ID: C73_contig_376_658
Type: pfam
Location: 774317 - 775144 (+)
Type: pfam
Location: 774317 - 775144 (+)
Gene ID: C73_contig_376_659
Type: pfam
Location: 775132 - 775593 (+)
Type: pfam
Location: 775132 - 775593 (+)
Gene ID: C73_contig_376_660
Type: TC
Location: 776009 - 777358 (+)
Type: TC
Location: 776009 - 777358 (+)
Gene ID: C73_contig_376_661
Type: TC
Location: 777455 - 778336 (+)
Type: TC
Location: 777455 - 778336 (+)
Gene ID: C73_contig_376_662
Type: TC
Location: 778345 - 779160 (+)
Type: TC
Location: 778345 - 779160 (+)
Gene ID: C73_contig_376_663
Type: CAZyme
Location: 779197 - 780387 (+)
Type: CAZyme
Location: 779197 - 780387 (+)
Gene ID: C73_contig_376_664
Type: CAZyme
Location: 780403 - 781590 (+)
Type: CAZyme
Location: 780403 - 781590 (+)
Gene ID: C73_contig_376_665
Type: pfam
Location: 781922 - 783289 (+)
Type: pfam
Location: 781922 - 783289 (+)
Gene ID: C73_contig_376_666
Type: pfam
Location: 783298 - 783882 (+)
Type: pfam
Location: 783298 - 783882 (+)
Gene ID: C73_contig_376_667
Type: TC
Location: 784080 - 784868 (-)
Type: TC
Location: 784080 - 784868 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C73_contig_376_658 | vegetarian > vegan | 1.95351 | 0.02852 |
| C73_contig_376_659 | vegetarian > vegan | 1.58109 | 0.02593 |
| C73_contig_376_660 | vegan > omnivore | 2.84330 | 0.03297 |
| C73_contig_376_661 | vegan > omnivore | 2.49707 | 0.04401 |
| C73_contig_376_662 | vegan > omnivore | 2.30842 | 0.03297 |
| C73_contig_376_664 | vegetarian > omnivore | 1.27019 | 0.04258 |
| C73_contig_376_666 | vegan > omnivore | 2.04656 | 0.02177 |