Cluster: C73.bin_12_CGC1
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: C73.bin_12
- CGC Family ID: CGCFAM_00009
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C73_contig_376 | C73_contig_376_43 | 51987 | 52931 | - | GT2 |
| pfam | C73_contig_376 | C73_contig_376_44 | 52935 | 54068 | - | LytR_cpsA_psr |
| TC | C73_contig_376 | C73_contig_376_45 | 54105 | 55523 | - | 9.B.18.1.1 |
| CAZyme | C73_contig_376 | C73_contig_376_46 | 55638 | 56744 | - | GT2 |
| CAZyme | C73_contig_376 | C73_contig_376_47 | 56716 | 58095 | - | GT2 |
| pfam | C73_contig_376 | C73_contig_376_48 | 58263 | 59984 | - | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | C73_contig_376 | C73_contig_376_49 | 60094 | 62052 | - | GT2 | GT2 |
| CAZyme | C73_contig_376 | C73_contig_376_50 | 62060 | 64081 | - | GT2 |
| pfam | C73_contig_376 | C73_contig_376_51 | 64066 | 66189 | - | PCMT | CMAS | Methyltransf_11 | Methyltransf_12 | Methyltransf_25 |
| TC | C73_contig_376 | C73_contig_376_52 | 66193 | 67497 | - | 3.A.1.103.6 |
| TC | C73_contig_376 | C73_contig_376_53 | 67511 | 68503 | - | 3.A.1.104.1 |
Gene ID: C73_contig_376_43
Type: CAZyme
Location: 51987 - 52931 (-)
Type: CAZyme
Location: 51987 - 52931 (-)
Gene ID: C73_contig_376_44
Type: pfam
Location: 52935 - 54068 (-)
Type: pfam
Location: 52935 - 54068 (-)
Gene ID: C73_contig_376_45
Type: TC
Location: 54105 - 55523 (-)
Type: TC
Location: 54105 - 55523 (-)
Gene ID: C73_contig_376_46
Type: CAZyme
Location: 55638 - 56744 (-)
Type: CAZyme
Location: 55638 - 56744 (-)
Gene ID: C73_contig_376_47
Type: CAZyme
Location: 56716 - 58095 (-)
Type: CAZyme
Location: 56716 - 58095 (-)
Gene ID: C73_contig_376_48
Type: pfam
Location: 58263 - 59984 (-)
Type: pfam
Location: 58263 - 59984 (-)
Gene ID: C73_contig_376_49
Type: CAZyme
Location: 60094 - 62052 (-)
Type: CAZyme
Location: 60094 - 62052 (-)
Gene ID: C73_contig_376_50
Type: CAZyme
Location: 62060 - 64081 (-)
Type: CAZyme
Location: 62060 - 64081 (-)
Gene ID: C73_contig_376_51
Type: pfam
Location: 64066 - 66189 (-)
Type: pfam
Location: 64066 - 66189 (-)
Gene ID: C73_contig_376_52
Type: TC
Location: 66193 - 67497 (-)
Type: TC
Location: 66193 - 67497 (-)
Gene ID: C73_contig_376_53
Type: TC
Location: 67511 - 68503 (-)
Type: TC
Location: 67511 - 68503 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.