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Cluster: C65.bin_5_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C65_contig_3130 C65_contig_3130_8 4229 4702 + GH55_1
NULL(UNKNOWN) C65_contig_3130 C65_contig_3130_9 4801 5226 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C65_contig_3130 C65_contig_3130_10 5223 7505 + GH94
CAZyme C65_contig_3130 C65_contig_3130_11 7556 9607 + GH161
NULL(UNKNOWN) C65_contig_3130 C65_contig_3130_12 9672 10715 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C65_contig_3130 C65_contig_3130_13 10733 12085 + GH30_1
STP C65_contig_3130 C65_contig_3130_14 12260 13660 + SBP_bac_1
TC C65_contig_3130 C65_contig_3130_15 13789 14700 + 3.A.1.1.23
TC C65_contig_3130 C65_contig_3130_16 14775 15611 + 3.A.1.1.34
STP C65_contig_3130 C65_contig_3130_17 15836 17674 + SBP_bac_1
TC C65_contig_3130 C65_contig_3130_18 17649 19313 + 8.A.59.2.1
Gene ID: C65_contig_3130_8
Type: CAZyme
Location: 4229 - 4702 (+)
Gene ID: C65_contig_3130_9
Type:
Location: 4801 - 5226 (+)
Gene ID: C65_contig_3130_10
Type: CAZyme
Location: 5223 - 7505 (+)
Gene ID: C65_contig_3130_11
Type: CAZyme
Location: 7556 - 9607 (+)
Gene ID: C65_contig_3130_12
Type:
Location: 9672 - 10715 (+)
Gene ID: C65_contig_3130_13
Type: CAZyme
Location: 10733 - 12085 (+)
Gene ID: C65_contig_3130_14
Type: STP
Location: 12260 - 13660 (+)
Gene ID: C65_contig_3130_15
Type: TC
Location: 13789 - 14700 (+)
Gene ID: C65_contig_3130_16
Type: TC
Location: 14775 - 15611 (+)
Gene ID: C65_contig_3130_17
Type: STP
Location: 15836 - 17674 (+)
Gene ID: C65_contig_3130_18
Type: TC
Location: 17649 - 19313 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C65_contig_3130_8 vegetarian > vegan 1.32712 0.00028
C65_contig_3130_9 vegetarian > vegan 2.52522 0.00028
C65_contig_3130_10 vegetarian > vegan 2.14171 0.00028
C65_contig_3130_11 vegetarian > vegan 2.77438 0.00028
C65_contig_3130_12 vegetarian > vegan 1.38290 0.00028
C65_contig_3130_14 vegetarian > vegan 2.11683 0.00028
C65_contig_3130_15 vegetarian > omnivore 1.00118 0.01259
C65_contig_3130_15 vegetarian > vegan 2.82468 0.00028
C65_contig_3130_16 vegetarian > vegan 2.81753 0.00028
C65_contig_3130_17 vegetarian > vegan 1.92998 0.00028
C65_contig_3130_18 vegetarian > vegan 2.63487 0.00028

🧭 Explore Read Mapping of CGC

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