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Cluster: C65.bin_5_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C65_contig_188 C65_contig_188_2511 2723053 2724918 + GT2 | GT2
CAZyme C65_contig_188 C65_contig_188_2512 2724920 2725873 + GT2
TC C65_contig_188 C65_contig_188_2513 2725992 2727395 + 9.B.18.1.1
pfam C65_contig_188 C65_contig_188_2514 2727412 2728953 + LytR_cpsA_psr
CAZyme C65_contig_188 C65_contig_188_2515 2729036 2729959 + GT2
Gene ID: C65_contig_188_2511
Type: CAZyme
Location: 2723053 - 2724918 (+)
Gene ID: C65_contig_188_2512
Type: CAZyme
Location: 2724920 - 2725873 (+)
Gene ID: C65_contig_188_2513
Type: TC
Location: 2725992 - 2727395 (+)
Gene ID: C65_contig_188_2514
Type: pfam
Location: 2727412 - 2728953 (+)
Gene ID: C65_contig_188_2515
Type: CAZyme
Location: 2729036 - 2729959 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C65_contig_188_2511 vegan > omnivore 1.59919 0.01514
C65_contig_188_2512 vegan > omnivore 1.01821 0.01514
C65_contig_188_2514 vegan > omnivore 1.26195 0.01514
C65_contig_188_2515 vegan > omnivore 2.29297 0.01514
C65_contig_188_2515 vegetarian > omnivore 1.65333 0.00952

🧭 Explore Read Mapping of CGC

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