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Cluster: C65.bin_5_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C65_contig_188 C65_contig_188_2503 2708928 2709734 + 3.A.1.104.1
TC C65_contig_188 C65_contig_188_2504 2709748 2711004 + 3.A.1.103.1
pfam C65_contig_188 C65_contig_188_2505 2711001 2713181 + RrnaAD | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
CAZyme C65_contig_188 C65_contig_188_2506 2713194 2715611 + GT2 | GT2
CAZyme C65_contig_188 C65_contig_188_2507 2715634 2718078 + GT2 | GT2
Gene ID: C65_contig_188_2503
Type: TC
Location: 2708928 - 2709734 (+)
Gene ID: C65_contig_188_2504
Type: TC
Location: 2709748 - 2711004 (+)
Gene ID: C65_contig_188_2505
Type: pfam
Location: 2711001 - 2713181 (+)
Gene ID: C65_contig_188_2506
Type: CAZyme
Location: 2713194 - 2715611 (+)
Gene ID: C65_contig_188_2507
Type: CAZyme
Location: 2715634 - 2718078 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C65_contig_188_2505 vegan > omnivore 1.17407 0.01514
C65_contig_188_2506 vegan > omnivore 2.02681 0.01514
C65_contig_188_2507 vegan > omnivore 1.12294 0.01514

🧭 Explore Read Mapping of CGC

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