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Cluster: C65.bin_5_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C65_contig_514 C65_contig_514_311 289033 289884 - 3.A.1.149.1
TF C65_contig_514 C65_contig_514_312 289878 290258 - GntR
pfam C65_contig_514 C65_contig_514_313 290412 290966 - DUF5662
CAZyme C65_contig_514 C65_contig_514_314 290926 292818 - GH13_11
Gene ID: C65_contig_514_311
Type: TC
Location: 289033 - 289884 (-)
Gene ID: C65_contig_514_312
Type: TF
Location: 289878 - 290258 (-)
Gene ID: C65_contig_514_313
Type: pfam
Location: 290412 - 290966 (-)
Gene ID: C65_contig_514_314
Type: CAZyme
Location: 290926 - 292818 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C65_contig_514_314 vegan > omnivore 1.34095 0.01514

🧭 Explore Read Mapping of CGC

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