dbCAN Logo

Cluster: C65.bin_5_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C65_contig_188 C65_contig_188_1976 2147227 2148513 + 3.A.1.1.4
TC C65_contig_188 C65_contig_188_1977 2148615 2149514 + 3.A.1.1.4
TC C65_contig_188 C65_contig_188_1978 2149507 2150334 + 3.A.1.1.4
TF C65_contig_188 C65_contig_188_1979 2150437 2151249 - HTH_AraC | HTH_AraC
CAZyme C65_contig_188 C65_contig_188_1980 2151353 2154397 + GH2
CAZyme C65_contig_188 C65_contig_188_1981 2154409 2156433 + GH42
Gene ID: C65_contig_188_1976
Type: TC
Location: 2147227 - 2148513 (+)
Gene ID: C65_contig_188_1977
Type: TC
Location: 2148615 - 2149514 (+)
Gene ID: C65_contig_188_1978
Type: TC
Location: 2149507 - 2150334 (+)
Gene ID: C65_contig_188_1979
Type: TF
Location: 2150437 - 2151249 (-)
Gene ID: C65_contig_188_1980
Type: CAZyme
Location: 2151353 - 2154397 (+)
Gene ID: C65_contig_188_1981
Type: CAZyme
Location: 2154409 - 2156433 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C65_contig_188_1978 vegan > omnivore 1.02100 0.01514

🧭 Explore Read Mapping of CGC

← Back to Cluster List