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Cluster: C65.bin_5_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C65_contig_188 C65_contig_188_1597 1773805 1775358 - 9.A.11.1.2
TF C65_contig_188 C65_contig_188_1598 1775456 1776136 - GntR
pfam C65_contig_188 C65_contig_188_1599 1776165 1777028 - GHMP_kinases_N | GHMP_kinases_C
CAZyme C65_contig_188 C65_contig_188_1600 1777138 1778694 - CBM50
Gene ID: C65_contig_188_1597
Type: TC
Location: 1773805 - 1775358 (-)
Gene ID: C65_contig_188_1598
Type: TF
Location: 1775456 - 1776136 (-)
Gene ID: C65_contig_188_1599
Type: pfam
Location: 1776165 - 1777028 (-)
Gene ID: C65_contig_188_1600
Type: CAZyme
Location: 1777138 - 1778694 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C65_contig_188_1597 vegan > omnivore 1.63496 0.01514
C65_contig_188_1598 vegan > omnivore 1.48239 0.01514
C65_contig_188_1599 vegan > omnivore 1.67801 0.01514
C65_contig_188_1600 vegan > omnivore 1.92738 0.01514
C65_contig_188_1600 vegetarian > omnivore 1.29262 0.01091

🧭 Explore Read Mapping of CGC

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